Package: metaArray

Version: 1.4.4

Command: D:\biocbld\1.8d\R\bin\R.exe CMD check metaArray_1.4.4.tar.gz

RetCode: 0

Time: 55.5 seconds

Status: WARNINGS

CheckDir: metaArray.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.8d/Rpacks/metaArray.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'metaArray/DESCRIPTION' ... OK
* this is package 'metaArray' version '1.4.4'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'metaArray' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Codoc mismatches from documentation object 'fit.em':
fit.em
  Code: function(x, cl = NULL, threshold = 1e-10)
  Docs: function(x, cl = NULL, threshold = 1e-04)

* checking Rd \usage sections ... OK
* checking for CRLF line endings in C/C++/Fortran sources/headers ... OK
* checking for portable compilation flags in Makevars ... OK
* creating metaArray-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating metaArray-manual.tex ... OK
* checking metaArray-manual.tex ... OK

WARNING: There was 1 warning, see
  D:/biocbld/1.8d/Rpacks/metaArray.Rcheck/00check.log
for details

installing R.css in D:/biocbld/1.8d/Rpacks/metaArray.Rcheck


---------- Making package metaArray ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making contr.d from contr.c
making dproc.d from dproc.c
making dproc2.d from dproc2.c
making intcor.d from intcor.c
making lowess.d from lowess.c
making mmath.d from mmath.c
making perm.d from perm.c
making poe.d from poe.c
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c contr.c -o contr.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c dproc.c -o dproc.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c dproc2.c -o dproc2.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c intcor.c -o intcor.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c lowess.c -o lowess.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c mmath.c -o mmath.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c perm.c -o perm.o
gcc   -Id:/biocbld/1.8d/R/include -Wall -O2 -DUSEDOUBLE -DWINDOWS  -c poe.c -o poe.o
poe.c: In function `poe_one_iter':
poe.c:132: warning: 'tmp1' might be used uninitialized in this function
windres --include-dir d:/biocbld/1.8d/R/include  -i metaArray_res.rc -o metaArray_res.o
gcc  -shared -s  -o metaArray.dll metaArray.def contr.o dproc.o dproc2.o intcor.o lowess.o mmath.o perm.o poe.o metaArray_res.o  -Ld:/biocbld/1.8d/R/bin -lm  -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'metaArray'
     Formats: text html latex example chm 
  Zscore                            text    html    latex   example chm
  em.draw                           text    html    latex   example chm
  find.init                         text    html    latex   example chm
  fit.em                            text    html    latex   example chm
  intcor                            text    html    latex   example chm
  logit                             text    html    latex           chm
  mdata                             text    html    latex           chm
  poe.em                            text    html    latex   example chm
  poe.mcmc                          text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.8d\Rpacks\metaArray.Rcheck\00_pkg_src\metaArray\chm\metaArray.chm


Compile time: 0 minutes, 0 seconds
10	Topics
13	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.8d\Rpacks\metaArray.Rcheck\00_pkg_src\metaArray\chm\metaArray.chm, 26,261 bytes
Compression decreased file by 1,765 bytes.
  adding MD5 sums

* DONE (metaArray)