Package: affycoretools

Version: 1.4.0

Command: D:\biocbld\1.8d\R\bin\R.exe CMD check affycoretools_1.4.0.tar.gz

RetCode: 0

Time: 233.3 seconds

Status: OK

CheckDir: affycoretools.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.8d/Rpacks/affycoretools.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'affycoretools/DESCRIPTION' ... OK
* this is package 'affycoretools' version '1.4.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'affycoretools' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating affycoretools-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating affycoretools-manual.tex ... OK
* checking affycoretools-manual.tex ... OK

installing R.css in D:/biocbld/1.8d/Rpacks/affycoretools.Rcheck


---------- Making package affycoretools ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'affycoretools'
     Formats: text html latex example chm 
  affystart                         text    html    latex           chm
  convert.back                      text    html    latex           chm
  foldFilt                          text    html    latex           chm
  getCols                           text    html    latex           chm
  getIndex                          text    html    latex           chm
  getans                            text    html    latex           chm
  hyperG2annaffy                    text    html    latex           chm
  intNames                          text    html    latex           chm
  limma2annaffy                     text    html    latex           chm
  make.cl                           text    html    latex           chm
  makeIndices                       text    html    latex           chm
  pca.legend                        text    html    latex           chm
  plotDeg                           text    html    latex   example chm
  plotMA                            text    html    latex           chm
  plotPCA                           text    html    latex           chm
  probes2table                      text    html    latex           chm
  tableFilt                         text    html    latex           chm
  vennCounts2                       text    html    latex   example chm
  vennSelect                        text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.8d\Rpacks\affycoretools.Rcheck\00_pkg_src\affycoretools\chm\affycoretools.chm


Compile time: 0 minutes, 0 seconds
20	Topics
31	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.8d\Rpacks\affycoretools.Rcheck\00_pkg_src\affycoretools\chm\affycoretools.chm, 38,113 bytes
Compression decreased file by 26,339 bytes.
  preparing package affycoretools for lazy loading

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

  adding MD5 sums

* DONE (affycoretools)