Package: KEGGSOAP

Version: 1.6.0

Command: D:\biocbld\1.8d\R\bin\R.exe CMD check KEGGSOAP_1.6.0.tar.gz

RetCode: 0

Time: 91.6 seconds

Status: OK

CheckDir: KEGGSOAP.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.8d/Rpacks/KEGGSOAP.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'KEGGSOAP/DESCRIPTION' ... OK
* this is package 'KEGGSOAP' version '1.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'KEGGSOAP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating KEGGSOAP-Ex.R ... OK
* checking examples ... OK
* creating KEGGSOAP-manual.tex ... OK
* checking KEGGSOAP-manual.tex ... OK

installing R.css in D:/biocbld/1.8d/Rpacks/KEGGSOAP.Rcheck


---------- Making package KEGGSOAP ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'KEGGSOAP'
     Formats: text html latex example chm 
  KEGGserver                        text    html    latex           chm
  get.genes.by.motifs               text    html    latex   example chm
  get.genes.by.organism             text    html    latex   example chm
  get.genes.by.pathway              text    html    latex   example chm
  get.motifs.by.gene                text    html    latex   example chm
  get.paralogs.by.gene              text    html    latex   example chm
  get.pathways.by.genes             text    html    latex   example chm
  getBestNeighbors                  text    html    latex   example chm
  list.organisms                    text    html    latex   example chm
  mark.pathway.by.objects           text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.8d\Rpacks\KEGGSOAP.Rcheck\00_pkg_src\KEGGSOAP\chm\KEGGSOAP.chm


Compile time: 0 minutes, 0 seconds
11	Topics
50	Local links
10	Internet links
1	Graphic


Created d:\biocbld\1.8d\Rpacks\KEGGSOAP.Rcheck\00_pkg_src\KEGGSOAP\chm\KEGGSOAP.chm, 30,931 bytes
Compression decreased file by 20,612 bytes.
  preparing package KEGGSOAP for lazy loading
  adding MD5 sums

* DONE (KEGGSOAP)