Package: GOstats

Version: 1.6.0

Command: D:\biocbld\1.8d\R\bin\R.exe CMD check GOstats_1.6.0.tar.gz

RetCode: 0

Time: 461.3 seconds

Status: WARNINGS

CheckDir: GOstats.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.8d/Rpacks/GOstats.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'GOstats/DESCRIPTION' ... OK
* this is package 'GOstats' version '1.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GOstats' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating GOstats-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... WARNING
Package vignettes without corresponding PDF:
  D:/biocbld/1.8d/Rpacks/GOstats.Rcheck/00_pkg_src/GOstats/inst/doc/GOvis.Rnw
* creating GOstats-manual.tex ... OK
* checking GOstats-manual.tex ... OK

WARNING: There was 1 warning, see
  D:/biocbld/1.8d/Rpacks/GOstats.Rcheck/00check.log
for details

installing R.css in D:/biocbld/1.8d/Rpacks/GOstats.Rcheck


---------- Making package GOstats ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'GOstats'
     Formats: text html latex example chm 
  ALL                               text    html    latex   example chm
  GOLeaves                          text    html    latex   example chm
  GOstats-defunct                   text    html    latex           chm
  Ndists                            text    html    latex   example chm
  compCorrGraph                     text    html    latex   example chm
  compGdist                         text    html    latex   example chm
  dropECode                         text    html    latex   example chm
  getEvidence                       text    html    latex   example chm
  getGOTerm                         text    html    latex   example chm
  getOntology                       text    html    latex   example chm
  hasGOannote                       text    html    latex   example chm
  hyperG2Affy                       text    html    latex   example chm
  hyperGtable                       text    html    latex   example chm
  idx2dimnames                      text    html    latex   example chm
  makeGOGraph                       text    html    latex   example chm
  notConn                           text    html    latex   example chm
  oneGOGraph                        text    html    latex   example chm
  shortestPath                      text    html    latex   example chm
  simLL                             text    html    latex   example chm
  triadCensus                       text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.8d\Rpacks\GOstats.Rcheck\00_pkg_src\GOstats\chm\GOstats.chm


Compile time: 0 minutes, 0 seconds
21	Topics
65	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.8d\Rpacks\GOstats.Rcheck\00_pkg_src\GOstats\chm\GOstats.chm, 41,965 bytes
Compression decreased file by 25,109 bytes.
  adding MD5 sums

* DONE (GOstats)