Package: Category

Version: 1.4.1

Command: D:\biocbld\1.8d\R\bin\R.exe CMD check Category_1.4.1.tar.gz

RetCode: 0

Time: 184.7 seconds

Status: OK

CheckDir: Category.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.8d/Rpacks/Category.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'Category/DESCRIPTION' ... OK
* this is package 'Category' version '1.4.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Category' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating Category-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating Category-manual.tex ... OK
* checking Category-manual.tex ... OK

installing R.css in D:/biocbld/1.8d/Rpacks/Category.Rcheck


---------- Making package Category ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'Category'
     Formats: text html latex example chm 
  GOHyperG                          text    html    latex   example chm
  GeneCategoryHyperGeoTestParams-cl text    html    latex           chm
  GeneCategoryHyperGeoTestResult-cl text    html    latex           chm
  GeneGoHyperGeoTestParams-class    text    html    latex           chm
  GeneKeggHyperGeoTestParams-class  text    html    latex           chm
  MAPAmat                           text    html    latex   example chm
  applyByCategory                   text    html    latex   example chm
  cateGOryMatrix                    text    html    latex   example chm
  categoryToEntrezBuilder           text    html    latex           chm
  findAMstats                       text    html    latex   example chm
  geneCategoryHyperGeoTest          text    html    latex           chm
  geneGoHyperGeoTest                text    html    latex   example chm
  geneKeggHyperGeoTest              text    html    latex   example chm
  getPathNames                      text    html    latex   example chm
  makeEBcontr                       text    html    latex   example chm
  probes2MAP                        text    html    latex   example chm
  probes2Path                       text    html    latex   example chm
  ttperm                            text    html    latex   example chm
  universeBuilder                   text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.8d\Rpacks\Category.Rcheck\00_pkg_src\Category\chm\Category.chm


Compile time: 0 minutes, 0 seconds
20	Topics
87	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.8d\Rpacks\Category.Rcheck\00_pkg_src\Category\chm\Category.chm, 39,725 bytes
Compression decreased file by 35,181 bytes.
  preparing package Category for lazy loading

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

  adding MD5 sums

* DONE (Category)