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adegenet, adproclus, AFM, AHPWR, akc, alakazam, AlphaBeta, ANF, AnimalHabitatNetwork, anipaths, aniSNA, aPEAR, apisensr, archeofrag, arulesViz, ASpli, autoharp, autostats, backbone, backShift, BallMapper, bamm, Banksy, bartMan, BASiNET, BASiNETEntropy, basket, batchelor, baycn, BayesNetBP, BayesSUR, bcgam, BCT, BDgraph, BeeBDC, BGmisc, bibliometrix, bigergm, BiocPkgTools, Bioi, BioM2, BioNERO, BioNet, bioregion, bipartite, BlockmodelingGUI, bluster, bnma, bnmonitor, bnviewer, BoolNet, bootcluster, bootnet, BoundaryStats, btergm, bwsTools, C443, CAMERA, cancerGI, Canek, cape, CARBayes, CARNIVAL, cartograflow, Cascade, cassowaryr, causact, causalDisco, causaleffect, CausalR, CBNplot, CCPlotR, ccTensor, CellNOptR, CellTrails, CEMiTool, CePa, ceRNAnetsim, CeRNASeek, CeTF, chatAI4R, checked, chemodiv, cholera, CHRONOS, cicero, CIMICE, CINNA, CiteFuse, CITMIC, CKMRpop, clevRvis, clipper, cliqueMS, CliquePercolation, ClustAssess, ClusterFoldSimilarity, clusterProfiler, ClustIRR, clustNet, ClusTorus, clustree, clustringr, CoDiNA, cogeqc, comato, communication, concatipede, concorR, condiments, CoNI, ConnectednessApproach, ConsensusClustering, CooRTweet, Corbi, corHMM, corpustools, corrViz, corTest, cosmosR, crandep, cranly, criticalpath, crosstalkr, csurvey, CTDquerier, CurricularAnalytics, cytometree, dcanr, dce, DCLEAR, DDPNA, deaR, debrowser, degreenet, delayed, DemoKin, dendroNetwork, DEsubs, dexterMST, DiagrammeR, diffcoexp, diffeRenTES, diffudist, diffusionMap, diffuStats, DirectedClustering, DIscBIO, discourseGT, distinctiveness, dm, DmelSGI, DNLC, dnr, dogesr, doolkit, drake, DrDimont, DrugSim2DR, DRviaSPCN, dsem, DTSEA, dupNodes, dynetNLAResistance, dyngen, dynwrap, easybgm, ecoCopula, ecodist, ECoL, econet, EcoNetGen, econetwork, economiccomplexity, EcotoneFinder, edgebundle, edgebundleR, edmcr, EDOIF, eff2, EGAD, EGAnet, eHDPrep, einet, EmbedSOM, EnMCB, enrichplot, enviGCMS, epiCo, epicontacts, EpiILMCT, epiNEM, epinetr, epiregulon.extra, epistasisGA, erah, ERPM, esATAC, espadon, ess, EstimateGroupNetwork, etree, EventPointer, evolqg, FactorCopula, fairadapt, fake, fakemake, fastnet, fastRG, fbnet, FCMapper, FedData, FELLA, fgga, FGNet, FindIt, finnsurveytext, FLAMES, flowGraph, fnets, foodingraph, ForestGapR, forestRK, fossilbrush, FrF2, fssemR, GALLO, gamCopula, gatom, GeDi, gemtc, genBaRcode, GeneGeneInteR, genekitr, geneplast, geneplast.data, GENESIS, GeNetIt, GeneTonic, GenomicInteractions, geohabnet, geonetwork, ggdag, ggenealogy, ggflowchart, ggm, ggnetwork, ggraph, gimme, GISSB, GMPro, GNAR, GNET2, goat, GOCompare, GoodFitSBM, GOxploreR, gRain, grainscape, grand, GRaNIE, graph4lg, graphclust, graphicalExtremes, graphicalVAR, graphlayouts, graphsim, graphTweets, gRbase, gRc, GREMLINS, gRim, gromovlab, gtexture, GWENA, handwriter, HeteroGGM, heteromixgm, highcharter, hisse, Holomics, HospitalNetwork, HPiP, HTSSIP, HTT, huge, hypeR, iCARH, ICDS, iCellR, icosa, IDMIR, idopNetwork, IDSpatialStats, igraphinshiny, iGraphMatch, 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phangorn, PhaseTypeR, PhenoGeneRanker, phenomis, PhosR, phylepic, phylopath, phyloregion, phyloseq, phyloseqGraphTest, phylosignal, phyloTop, piano, piecewiseSEM, PIUMA, pkggraph, pkgnet, PlackettLuce, plantTracker, PLEXI, plinkQC, PLNmodels, pmd, PNAR, polymapR, PolyTree, pomdp, pop, poppr, POSetR, prioritizr, ProgModule, ProjectManagement, provGraphR, PSMatch, psSubpathway, psygenet2r, ptools, PUGMM, PWIR, pwOmics, qdap, QFeatures, qgraph, qmtools, quanteda.textplots, R.temis, R3CPET, R6causal, RaceID, Racmacs, Radviz, rags2ridges, RavenR, rcausim, RcextTools, RcmdrPlugin.RMTCJags, rcrimeanalysis, RCSL, RCX, rD3plot, rdracor, RDS, ReactomePA, RedeR, refdb, regnet, ReliabilityTheory, remify, rEMM, RepertoiR, ResIN, RevEcoR, rflexscan, rgexf, rhcoclust, RITAN, riverconn, RLassoCox, rmcfs, rnaCrosslinkOO, RNAseqNet, rnmamod, Rnmr1D, roads, robber, RobustIV, robustrao, roots, roughnet, RPANDA, rPref, rscc, rScudo, rSDI, rsetse, RSP, rSpectral, rsppfp, rsyntax, RTN, rTwig, RWgraph, saotd, saseR, SBGNview, sBIC, sbm, SBN, scalpel, scapGNN, scClassify, sccore, scDblFinder, scDHA, SCFA, scHOT, scider, scINSIGHT, scistreer, scMerge, scMultiSim, ScorePlus, SCORPION, scran, scRepertoire, scRNAtools, scTensor, scTGIF, scTreeViz, secrlinear, SelectBoost, SEMID, SemNeT, semPlot, seqcombo, SeqDetect, seqHMM, SeqNet, Seurat, sfcr, sfnetworks, SFSI, sgraph, SGSeq, sharp, shazam, shock, SID, sidier, sigmajs, SignacX, signnet, simcausal, simDAG, simdata, simer, simona, simplifyNet, SingleCellSignalR, singleCellTK, SIRE, skynet, slingshot, smallstuff, SmCCNet, SMITE, smotefamily, snahelper, snowboot, SOAs, SoilR, solitude, spacejamr, SpaDES.core, Spaniel, spathial, SpatialCPie, SpatialGraph, spatialHeatmap, spatsoc, specr, spinner, SplicingGraphs, spNetwork, SPONGE, spreadr, ssifs, ssMutPA, sSNAPPY, statGraph, stemmatology, stminsights, STraTUS, STRINGdb, SubtypeDrug, supraHex, SurvHiDim, synaptome.db, syntenet, SystemicR, TangledFeatures, targets, TAShiny, TDA, ternarynet, text2map, textrank, tidygraph, tidySEM, tilemaps, tip, Tlasso, TOHM, TOmicsVis, TOP, topologyGSA, tosr, TPEA, trackViewer, tradeSeq, TrajectoryUtils, transcriptogramer, TreeAndLeaf, TreeDimensionTest, treefit, treemap, TRONCO, TSCAN, UNCOVER, uSORT, VARDetect, veloviz, VertexSimilarity, VertexWiseR, ViSEAGO, vissE, vivainsights, vivid, VOSONDash, WayFindR, wdnet, WebGestaltR, webSDM, whitechapelR, whomds, wpa, wppi, wTO, XINA, xLLiM, ZygosityPredictor |
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agop, anocva, ape, atrrr, BayesSpace, BiCausality, bifurcatingr, bio3d, BiocFHIR, biodbKegg, BiodiversityR, blackbox, bnclassify, bnlearn, BoomSpikeSlab, breathteststan, bsub, CASCORE, CBnetworkMA, cfid, chessboard, chouca, ChromSCape, cito, clusterExperiment, CNORfeeder, CNVScope, coglasso, ConnMatTools, countland, CovCombR, covtracer, cppRouting, csdR, cspp, d3po, dagitty, DAPAR, dartR, dartR.base, dartR.captive, dartR.popgen, datapack, dbscan, DDD, debkeepr, deepdep, destiny, dimRed, diverse, dodgr, dosearch, DramaAnalysis, DRquality, dst, dyndimred, EBcoexpress, econullnetr, ecpc, egor, eicm, epigraphdb, epiworldR, factoextra, FCPS, finbipartite, FinNet, frechet, fsbrain, fullRankMatrix, functiondepends, funspotr, gamlss.ggplots, genscore, GGally, ggokabeito, ggsc, ghypernet, goldfish, graphicalMCP, graphon, greed, gsbm, HarmonizedTCGAData, HCAData, HelpersMG, hero, hydra, igraphdata, industRial, inferCSN, invertiforms, IOHanalyzer, isa2, iSEEu, isotracer, knitrBootstrap, latrend, lava, lfe, Libra, lionessR, lolog, LSTbook, maotai, MBNMAtime, metadat, MetNet, miaSim, miic, MineICA, mistyR, mlr3pipelines, mlr3shiny, mlr3torch, MOSim, MR.RGM, MSG, NAC, nbTransmission, Nebulosa, net4pg, netcmc, netmediate, netmeta, netSmooth, nett, NetworkInference, NetworkRiskMeasures, nexus, nosoi, oaqc, outbreaker2, PairViz, paramlink, pcutils, pcxn, pedtools, pkgndep, polmineR, polyqtlR, primer, protti, purgeR, rangeMapper, raster, rBiopaxParser, rbmn, RcisTarget, RCy3, readsdr, rebook, recipes, ReDaMoR, repo, ReporterScore, rgraph6, rIsing, rnetcarto, RPointCloud, rquery, RScelestial, RTMB, rtweet, rvinecopulib, Rwclust, Ryacas, Ryacas0, scDesign3, scDiffCom, schex, scPipe, secr, secuTrialR, sensitivity, seqtrie, sfdep, sharpshootR, SIMLR, simplifyEnrichment, sirt, SITH, spatialreg, spdep, spdynmod, speakeasyR, spectralGraphTopology, splatter, SplicingGraphs, SPOTlight, stabm, stagedtrees, stm, stplanr, surface, surveygraph, svs, SynExtend, TCGAbiolinks, TDApplied, textmineR, TextMiningGUI, textplot, tgver, tidybulk, tidyjson, tidySingleCellExperiment, tidySpatialExperiment, timeOmics, TNC, treeio, treespace, treestats, TunePareto, visNetwork, vkR, vocaldia, vosonSML, vsp, widyr, wikkitidy, wildlifeDI, xgboost, xtranat, zoomerjoin |