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### Running command:
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###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/Rscript -e "BiocCheck::BiocCheck('ExperimentHubData_1.38.0.tar.gz','quit-with-status'=TRUE)"
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── Installing ExperimentHubData ────────────────────────────────────────────────
✔ Package installed successfully
── ExperimentHubData session metadata ──────────────────────────────────────────
→ sourceDir: /tmp/RtmpF3LJLO/file77e8949e72df0/ExperimentHubData
→ BiocVersion: 3.23
→ Package: ExperimentHubData
→ PackageVersion: 1.38.0
→ BiocCheckDir: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/ExperimentHubData.BiocCheck
→ BiocCheckVersion: 1.48.0
→ sourceDir: /tmp/RtmpF3LJLO/file77e8949e72df0/ExperimentHubData
→ installDir: /tmp/RtmpF3LJLO/file77e8954a63fc0
→ isTarBall: TRUE
→ platform: unix
── Running BiocCheck on ExperimentHubData ──────────────────────────────────────
* Checking for deprecated package usage...
* Checking for remote package usage...
* Checking for 'LazyData: true' usage...
* Checking version number...
* Checking for version number mismatch...
* Checking version number validity...
* Checking R version dependency...
* Checking package size...
* Checking individual file sizes...
* Checking biocViews...
* Checking that biocViews are present...
* Checking package type based on biocViews...
→ Software
* Checking for non-trivial biocViews...
* Checking that biocViews come from the same category...
* Checking biocViews validity...
* Checking for recommended biocViews...
* Checking build system compatibility...
* Checking for proper Description: field...
* Checking if DESCRIPTION is well formatted...
* Checking for whitespace in DESCRIPTION field names...
* Checking that Package field matches directory/tarball name...
* Checking for Version: field...
ℹ NOTE: Consider adding the maintainer's ORCID iD in 'Authors@R' with
'comment=c(ORCID="...")'
* Checking License: for restrictive use...
* Checking for recommended DESCRIPTION fields...
ℹ NOTE: Provide 'URL', 'BugReports' field(s) in DESCRIPTION
* Checking for Bioconductor software dependencies...
ℹ Bioconductor dependencies found in Imports & Depends (40%).
* Checking for pinned package versions in DESCRIPTION...
* Checking for 'fnd' role in Authors@R...
ℹ NOTE: No 'fnd' role found in Authors@R. If the work is supported by a grant,
consider adding the 'fnd' role to the list of authors.
* Checking NAMESPACE...
* Checking .Rbuildignore...
* Checking for stray BiocCheck output folders...
* Checking vignette directory...
! WARNING: Evaluate more vignette chunks.
ℹ 1 out of 1 code chunks = 100% unevaluated
ℹ 
* Checking package installation calls in R code...
* Checking for library/require of ExperimentHubData...
* Checking coding practice...
ℹ NOTE: Avoid sapply(); use vapply()
  Found in files:
    • R/addResources.R (line 26, column 12)
ℹ NOTE: Avoid using '=' for assignment and use '<-' instead
  Found in files:
    • R/ExperimentHubMetadata-class.R (line 33, column 12)
    • R/ExperimentHubMetadata-class.R (line 58, column 19)
    • R/ExperimentHubMetadata-class.R (line 79, column 118)
ℹ NOTE: Avoid the use of 'paste' in condition signals
  Found in files:
    • R/addResources.R (line 15, column 18)
    • ...
    • R/ExperimentHubMetadata-class.R (line 141, column 14)
* Checking parsed R code in R directory, examples, vignettes...
* Checking function lengths...
ℹ NOTE: The recommended function length is 50 lines or less. There are 2
functions greater than 50 lines.
  The longest 5 functions are:
    • ExperimentHubMetadata() (R/ExperimentHubMetadata-class.R): 92 lines
    • makeExperimentHubMetadata() (R/ExperimentHubMetadata-class.R): 77 lines
* Checking man page documentation...
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘ExperimentHubData’
No methods found in package ‘rtracklayer’ for request: ‘trackName<-’ when loading ‘AnnotationHubData’
✖ ERROR: At least 80% of man pages documenting exported objects must have
runnable examples.
  The following pages do not:
    • addResources.Rd
    • makeExperimentHubMetadata.Rd
ℹ NOTE: Usage of dontrun / donttest tags found in man page examples. 67% of man
pages use at least one of these tags.
  Found in files:
    • addResources.Rd
    • makeExperimentHubMetadata.Rd
ℹ NOTE: Use donttest instead of dontrun.
  Found in files:
    • addResources.Rd
    • makeExperimentHubMetadata.Rd
* Checking package NEWS...
* Checking unit tests...
ℹ NOTE: Consider adding unit tests. We strongly encourage them. See
https://contributions.bioconductor.org/tests.html
* Checking skip_on_bioc() in tests...
* Checking formatting of DESCRIPTION, NAMESPACE, man pages, R source, and
vignette source...
ℹ NOTE: Consider shorter lines; 16 lines (2%) are > 80 characters long.
  First few lines:
    • R/ExperimentHubMetadata-class.R#L30 if (length(.views) <= 1) stop("Add 2
    ...
    • ...
    • vignettes/ExperimentHubData.Rmd#L40 read inst/extdata/metadata.csv with
    `Exp ...
ℹ NOTE: Consider 4 spaces instead of tabs; 126 lines (15%) contain tabs.
  First few lines:
    • man/ExperimentHubMetadata-class.Rd#L25
    BiocVersion=BiocManager::version(), ...
    • ...
    • man/makeExperimentHubMetadata.Rd#L161 } ...
ℹ NOTE: Consider multiples of 4 spaces for line indents; 184 lines (22%) are
not.
  First few lines:
    • R/addResources.R#L40 "records in Exper ...
    • ...
    • man/makeExperimentHubMetadata.Rd#L200 } ...
ℹ See https://contributions.bioconductor.org/r-code.html
ℹ See styler package: https://cran.r-project.org/package=styler as described in
the BiocCheck vignette.
* Checking if package already exists in CRAN...
* Checking for bioc-devel mailing list subscription...
ℹ NOTE: Cannot determine whether maintainer is subscribed to the Bioc-Devel
mailing list (requires admin credentials). Subscribe here:
https://stat.ethz.ch/mailman/listinfo/bioc-devel
* Checking for support site registration...
ℹ Maintainer email is ok.
── BiocCheck v1.48.0 results ───────────────────────────────────────────────────
✖ 1 ERRORS | ⚠ 1 WARNINGS | ℹ 14 NOTES
ℹ See the ExperimentHubData.BiocCheck folder and run
  browseVignettes(package = 'BiocCheck')
  for details.