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### Running command:
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###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/Rscript -e "BiocCheck::BiocCheck('BiocFileCache_3.2.0.tar.gz','quit-with-status'=TRUE)"
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── Installing BiocFileCache ────────────────────────────────────────────────────
✔ Package installed successfully
── BiocFileCache session metadata ──────────────────────────────────────────────
→ sourceDir: /tmp/RtmpDLGAiR/file7361d2a3b1141/BiocFileCache
→ BiocVersion: 3.23
→ Package: BiocFileCache
→ PackageVersion: 3.2.0
→ BiocCheckDir: /media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/BiocFileCache.BiocCheck
→ BiocCheckVersion: 1.48.0
→ sourceDir: /tmp/RtmpDLGAiR/file7361d2a3b1141/BiocFileCache
→ installDir: /tmp/RtmpDLGAiR/file7361d35e9a423
→ isTarBall: TRUE
→ platform: unix
── Running BiocCheck on BiocFileCache ──────────────────────────────────────────
* Checking for deprecated package usage...
* Checking for remote package usage...
* Checking for 'LazyData: true' usage...
* Checking version number...
* Checking for version number mismatch...
* Checking version number validity...
* Checking R version dependency...
ℹ NOTE: Update R version dependency from 3.4.0 to 4.6.0
* Checking package size...
* Checking individual file sizes...
* Checking biocViews...
* Checking that biocViews are present...
* Checking package type based on biocViews...
→ Software
* Checking for non-trivial biocViews...
* Checking that biocViews come from the same category...
* Checking biocViews validity...
* Checking for recommended biocViews...
* Checking build system compatibility...
* Checking for proper Description: field...
* Checking if DESCRIPTION is well formatted...
* Checking for whitespace in DESCRIPTION field names...
* Checking that Package field matches directory/tarball name...
* Checking for Version: field...
ℹ NOTE: Consider adding the maintainer's ORCID iD in 'Authors@R' with
'comment=c(ORCID="...")'
* Checking License: for restrictive use...
* Checking for recommended DESCRIPTION fields...
ℹ NOTE: Provide 'URL' field(s) in DESCRIPTION
* Checking for Bioconductor software dependencies...
! WARNING: No Bioconductor dependencies detected. Note that some infrastructure
packages may not have Bioconductor dependencies. For more information, reach
out to the Bioconductor community and/or consider a CRAN submission.
* Checking for pinned package versions in DESCRIPTION...
* Checking for 'fnd' role in Authors@R...
ℹ NOTE: No 'fnd' role found in Authors@R. If the work is supported by a grant,
consider adding the 'fnd' role to the list of authors.
* Checking NAMESPACE...
* Checking .Rbuildignore...
* Checking for stray BiocCheck output folders...
* Checking vignette directory...
ℹ NOTE: Vignette(s) found with missing chunk labels
  Found in files:
    • BiocFileCache_Troubleshooting.Rmd
    • BiocFileCache_UseCases.Rmd
    • BiocFileCache.Rmd
* Checking package installation calls in R code...
* Checking for library/require of BiocFileCache...
* Checking coding practice...
ℹ NOTE: Avoid 'cat' and 'print' outside of 'show' methods
  Found in files:
    • cat() in R/httr.R (line 177, column 9)
    • ...
    • cat() in R/makeCachedActiveBinding.R (line 40, column 17)
ℹ NOTE: Avoid using '=' for assignment and use '<-' instead
  Found in files:
    • R/BiocFileCache-class.R (line 7, column 20)
    • ...
    • R/httr.R (line 153, column 21)
ℹ NOTE: Avoid the use of 'paste' in condition signals
  Found in files:
    • R/BiocFileCache-class.R (line 1224, column 13)
ℹ NOTE: Avoid redundant 'stop' and 'warn*' in signal conditions
  Found in files:
    • R/BiocFileCache-class.R (line 563, column 55)
    • ...
    • R/utilities.R (line 198, column 14)
* Checking parsed R code in R directory, examples, vignettes...
ℹ NOTE: Avoid '<<-' if possible (found 3 times)
  • <<- in R/utilities.R (line 24, column 22)
  • <<- in R/utilities.R (line 28, column 22)
  • <<- in R/utilities.R (line 33, column 22)
* Checking function lengths...
ℹ NOTE: The recommended function length is 50 lines or less. There are 8
functions greater than 50 lines.
  The longest 5 functions are:
    • _anonymous_.68() (R/makeBiocFileCacheFromDataFrame.R): 145 lines
    • ...
    • _anonymous_.535() (R/BiocFileCache-class.R): 66 lines
* Checking man page documentation...
! WARNING: Empty or missing \value sections found in man page(s).
  Found in files:
    • man/makeCachedActiveBinding.Rd
ℹ NOTE: Usage of dontrun / donttest tags found in man page examples. 50% of man
pages use at least one of these tags.
  Found in files:
    • BFCOption.Rd
    • BiocFileCache-class.Rd
ℹ NOTE: Use donttest instead of dontrun.
  Found in files:
    • BiocFileCache-class.Rd
* Checking package NEWS...
* Checking unit tests...
* Checking skip_on_bioc() in tests...
* Checking formatting of DESCRIPTION, NAMESPACE, man pages, R source, and
vignette source...
ℹ NOTE: Consider shorter lines; 28 lines (1%) are > 80 characters long.
  First few lines:
    • R/BiocFileCache-class.R#L326 action=action, proxy=proxy, d ...
    • ...
    • vignettes/BiocFileCache.Rmd#L699 and file permissions, you may run the fo
    ...
ℹ NOTE: Consider 4 spaces instead of tabs; 31 lines (1%) contain tabs.
  First few lines:
    • vignettes/BiocFileCache_Troubleshooting.Rmd#L169
    moveFiles<-function(package){ ...
    • ...
    • vignettes/BiocFileCache.Rmd#L623 metadataName="resourceMetadata") ...
ℹ NOTE: Consider multiples of 4 spaces for line indents; 143 lines (3%) are
not.
  First few lines:
    • R/BiocFileCache-class.R#L254 fname=c("unique", "exact")) ...
    • ...
    • vignettes/BiocFileCache.Rmd#L632 * `removebfc()` ...
ℹ See https://contributions.bioconductor.org/r-code.html
ℹ See styler package: https://cran.r-project.org/package=styler as described in
the BiocCheck vignette.
* Checking if package already exists in CRAN...
* Checking for bioc-devel mailing list subscription...
ℹ NOTE: Cannot determine whether maintainer is subscribed to the Bioc-Devel
mailing list (requires admin credentials). Subscribe here:
https://stat.ethz.ch/mailman/listinfo/bioc-devel
* Checking for support site registration...
ℹ Maintainer is registered at support site.
ℹ Package is in the Support Site Watched Tags.
── BiocCheck v1.48.0 results ───────────────────────────────────────────────────
✖ 0 ERRORS | ⚠ 2 WARNINGS | ℹ 17 NOTES
ℹ See the BiocFileCache.BiocCheck folder and run
  browseVignettes(package = 'BiocCheck')
  for details.