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This page was generated on 2025-10-02 11:39 -0400 (Thu, 02 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4831
merida1macOS 12.7.5 Montereyx86_644.5.1 RC (2025-06-05 r88288) -- "Great Square Root" 4612
kjohnson1macOS 13.6.6 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4553
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4584
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 437/2341HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
consICA 2.6.0  (landing page)
Petr V. Nazarov
Snapshot Date: 2025-09-29 13:40 -0400 (Mon, 29 Sep 2025)
git_url: https://git.bioconductor.org/packages/consICA
git_branch: RELEASE_3_21
git_last_commit: 97d984a
git_last_commit_date: 2025-04-15 12:55:54 -0400 (Tue, 15 Apr 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  

BUILD results for consICA on merida1

To the developers/maintainers of the consICA package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/consICA.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: consICA
Version: 2.6.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data consICA
StartedAt: 2025-09-29 18:06:33 -0400 (Mon, 29 Sep 2025)
EndedAt: 2025-09-29 18:09:16 -0400 (Mon, 29 Sep 2025)
EllapsedTime: 163.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data consICA
###
##############################################################################
##############################################################################


* checking for file ‘consICA/DESCRIPTION’ ... OK
* preparing ‘consICA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ConsICA.Rmd’ using rmarkdown
2025-09-29 18:08:34.514 R[88570:433446665] XType: com.apple.fonts is not accessible.
2025-09-29 18:08:34.516 R[88570:433446665] XType: XTFontStaticRegistry is enabled.

Quitting from ConsICA.Rmd:111-131 [unnamed-chunk-11]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `url()`:
! cannot open the connection to 'http://edu.modas.lu/data/consICA/cica_GOs_20_s2022.rds'
---
Backtrace:
    ▆
 1. ├─base::readRDS(...)
 2. └─base::url(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'ConsICA.Rmd' failed with diagnostics:
cannot open the connection to 'http://edu.modas.lu/data/consICA/cica_GOs_20_s2022.rds'
--- failed re-building ‘ConsICA.Rmd’

SUMMARY: processing the following file failed:
  ‘ConsICA.Rmd’

Error: Vignette re-building failed.
Execution halted