Thomas Naake
| Snapshot Date: 2025-12-25 13:45 -0500 (Thu, 25 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/MatrixQCvis |
| git_branch: RELEASE_3_22 |
| git_last_commit: b35fe86 |
| git_last_commit_date: 2025-10-29 11:09:24 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-12-29 11:58 -0500 (Mon, 29 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4883 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4671 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1204/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MatrixQCvis 1.18.0 (landing page) Thomas Naake
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the MatrixQCvis package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MatrixQCvis.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: MatrixQCvis |
| Version: 1.18.0 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data MatrixQCvis |
| StartedAt: 2025-12-26 03:17:27 -0000 (Fri, 26 Dec 2025) |
| EndedAt: 2025-12-26 03:18:56 -0000 (Fri, 26 Dec 2025) |
| EllapsedTime: 89.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data MatrixQCvis
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* checking for file ‘MatrixQCvis/DESCRIPTION’ ... OK
* preparing ‘MatrixQCvis’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MatrixQCvis.Rmd’ using rmarkdown
Quitting from MatrixQCvis.Rmd:269-272 [hist_sample]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_download()`:
! Timeout was reached [cdn.plot.ly]:
Connection timed out after 10001 milliseconds
---
Backtrace:
▆
1. ├─plotly::partial_bundle(hist_sample(tbl, category = "type"))
2. │ ├─plotly::plotly_build(p)
3. │ └─plotly:::plotly_build.plotly(p)
4. │ └─plotly:::verify_partial_bundle(p)
5. │ └─curl::curl_download(...)
6. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'MatrixQCvis.Rmd' failed with diagnostics:
Timeout was reached [cdn.plot.ly]:
Connection timed out after 10001 milliseconds
--- failed re-building ‘MatrixQCvis.Rmd’
SUMMARY: processing the following file failed:
‘MatrixQCvis.Rmd’
Error: Vignette re-building failed.
Execution halted