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This page was generated on 2025-07-24 09:37 -0400 (Thu, 24 Jul 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 (2025-04-11) -- "How About a Twenty-Six" 914
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Package 116/229HostnameOS / ArchINSTALLBUILDCHECK
gwascat 2.41.1  (landing page)
VJ Carey
Snapshot Date: 2025-07-24 06:00 -0400 (Thu, 24 Jul 2025)
git_url: https://git.bioconductor.org/packages/gwascat
git_branch: devel
git_last_commit: 96538e0
git_last_commit_date: 2025-06-21 01:01:55 -0400 (Sat, 21 Jun 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for gwascat on teran2

To the developers/maintainers of the gwascat package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: gwascat
Version: 2.41.1
Command: /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data gwascat
StartedAt: 2025-07-24 06:52:59 -0400 (Thu, 24 Jul 2025)
EndedAt: 2025-07-24 06:54:11 -0400 (Thu, 24 Jul 2025)
EllapsedTime: 72.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data gwascat
###
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* checking for file ‘gwascat/DESCRIPTION’ ... OK
* preparing ‘gwascat’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘gwascat.Rmd’ using rmarkdown

Quitting from gwascat.Rmd:164-166 [dorunap]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'gwascat.Rmd' failed with diagnostics:
The `facets` argument of `facet_grid()` was deprecated in ggplot2 2.2.0
and is now defunct.
ℹ Please use the `rows` argument instead.
--- failed re-building ‘gwascat.Rmd’

--- re-building ‘gwascatOnt.Rmd’ using rmarkdown
--- finished re-building ‘gwascatOnt.Rmd’

SUMMARY: processing the following file failed:
  ‘gwascat.Rmd’

Error: Vignette re-building failed.
Execution halted