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This page was generated on 2025-11-01 11:32 -0400 (Sat, 01 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4774
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 432/2321HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
consensusOV 1.33.0  (landing page)
Benjamin Haibe-Kains
Snapshot Date: 2025-10-31 13:40 -0400 (Fri, 31 Oct 2025)
git_url: https://git.bioconductor.org/packages/consensusOV
git_branch: devel
git_last_commit: a478760
git_last_commit_date: 2025-10-29 10:39:32 -0400 (Wed, 29 Oct 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  NO, package depends on 'GSVA' which is not available


BUILD results for consensusOV on nebbiolo1

To the developers/maintainers of the consensusOV package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/consensusOV.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: consensusOV
Version: 1.33.0
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data consensusOV
StartedAt: 2025-10-31 17:10:50 -0400 (Fri, 31 Oct 2025)
EndedAt: 2025-10-31 17:13:13 -0400 (Fri, 31 Oct 2025)
EllapsedTime: 143.1 seconds
RetCode: 0
Status:   OK  
PackageFile: consensusOV_1.33.0.tar.gz
PackageFileSize: 3.296 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data consensusOV
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* checking for file ‘consensusOV/DESCRIPTION’ ... OK
* preparing ‘consensusOV’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... OK
Warning in person1(given = given[[i]], family = family[[i]], middle = middle[[i]],  :
  It is recommended to use ‘given’ instead of ‘middle’.
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘consensusOV_1.33.0.tar.gz’