| Back to Build/check report for BioC 3.23: simplified long |
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This page was generated on 2026-02-23 11:32 -0500 (Mon, 23 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4871 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1733/2354 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Rcollectl 1.11.0 (landing page) Vincent Carey
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| See other builds for Rcollectl in R Universe. | ||||||||||||||
|
To the developers/maintainers of the Rcollectl package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rcollectl.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: Rcollectl |
| Version: 1.11.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rcollectl |
| StartedAt: 2026-02-22 19:48:52 -0500 (Sun, 22 Feb 2026) |
| EndedAt: 2026-02-22 19:49:13 -0500 (Sun, 22 Feb 2026) |
| EllapsedTime: 21.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rcollectl
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* checking for file ‘Rcollectl/DESCRIPTION’ ... OK
* preparing ‘Rcollectl’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘Rcollectl.Rmd’ using rmarkdown
Quitting from Rcollectl.Rmd:114-136 [lkts]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `cl_parse()`:
! length(inds) == 2 is not TRUE
---
Backtrace:
▆
1. ├─Rcollectl::plot_usage(cl_parse(path))
2. │ ├─ggplot2::ggplot(vizdf(x), aes(x = tm, y = value))
3. │ └─Rcollectl:::vizdf(x)
4. │ ├─base::rbind(cpu_active(x), mem_used(x), net_KB_cum(x), dsk_KBwr_cum(x))
5. │ └─Rcollectl (local) cpu_active(x)
6. │ ├─base::data.frame(...)
7. │ └─base::as.POSIXct(x$sampdate, tz = tz)
8. └─Rcollectl::cl_parse(path)
9. └─base::stopifnot(length(inds) == 2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Rcollectl.Rmd' failed with diagnostics:
length(inds) == 2 is not TRUE
--- failed re-building ‘Rcollectl.Rmd’
SUMMARY: processing the following file failed:
‘Rcollectl.Rmd’
Error: Vignette re-building failed.
Execution halted