Multiple platform build/check report for BioC 3.23 - BUILD results for RcisTarget on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 alpha (2026-04-05 r89794)	4957
kjohnson3	macOS 13.7.7 Ventura	arm64	4.6.0 alpha (2026-04-08 r89818)	4686
kunpeng2	Linux (openEuler 24.03 LTS)	aarch64	R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"	4627
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for RcisTarget on kunpeng2

To the developers/maintainers of the RcisTarget package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RcisTarget.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: RcisTarget

Version: 1.31.1

Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data RcisTarget

StartedAt: 2026-04-17 01:22:37 -0000 (Fri, 17 Apr 2026)

EndedAt: 2026-04-17 01:24:14 -0000 (Fri, 17 Apr 2026)

EllapsedTime: 97.1 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data RcisTarget
###
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* checking for file ‘RcisTarget/DESCRIPTION’ ... OK
* preparing ‘RcisTarget’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘RcisTarget_MainTutorial.Rmd’ using rmarkdown
--- finished re-building ‘RcisTarget_MainTutorial.Rmd’

--- re-building ‘Tutorial_AnalysisOfGenomicRegions.Rmd’ using rmarkdown

Quitting from Tutorial_AnalysisOfGenomicRegions.Rmd:31-36 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
---
Backtrace:
    ▆
 1. └─base::loadNamespace(x)
 2.   ├─base::namespaceImportFrom(...)
 3.   │ └─base::asNamespace(ns)
 4.   └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
 5.     └─base::namespaceImportClasses(...)
 6.       └─base::namespaceImportFrom(self, asNamespace(ns), vars, from = from)
 7.         └─base::importIntoEnv(impenv, impnames, ns, impvars)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'Tutorial_AnalysisOfGenomicRegions.Rmd' failed with diagnostics:
class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
--- failed re-building ‘Tutorial_AnalysisOfGenomicRegions.Rmd’

--- re-building ‘Tutorial_AnalysisWithBackground.Rmd’ using rmarkdown
--- finished re-building ‘Tutorial_AnalysisWithBackground.Rmd’

SUMMARY: processing the following file failed:
  ‘Tutorial_AnalysisOfGenomicRegions.Rmd’

Error: Vignette re-building failed.
Execution halted