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This page was generated on 2025-09-20 12:03 -0400 (Sat, 20 Sep 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4814
lconwaymacOS 12.7.1 Montereyx86_644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4603
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4547
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4553
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 825/2333HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneTonic 3.3.2  (landing page)
Federico Marini
Snapshot Date: 2025-09-19 13:45 -0400 (Fri, 19 Sep 2025)
git_url: https://git.bioconductor.org/packages/GeneTonic
git_branch: devel
git_last_commit: 666ed57
git_last_commit_date: 2025-05-09 07:17:35 -0400 (Fri, 09 May 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    ERROR  skipped
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    ERROR  skippedskipped
taishanLinux (openEuler 24.03 LTS) / aarch64  ERROR    ERROR  skipped


BUILD results for GeneTonic on nebbiolo2

To the developers/maintainers of the GeneTonic package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneTonic.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GeneTonic
Version: 3.3.2
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 GeneTonic
StartedAt: 2025-09-19 17:44:00 -0400 (Fri, 19 Sep 2025)
EndedAt: 2025-09-19 17:44:11 -0400 (Fri, 19 Sep 2025)
EllapsedTime: 11.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 GeneTonic
###
##############################################################################
##############################################################################


* checking for file ‘GeneTonic/DESCRIPTION’ ... OK
* preparing ‘GeneTonic’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘GeneTonic’ ...
** this is package ‘GeneTonic’ version ‘3.3.2’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘backbone.extract’ is not exported by 'namespace:backbone'
Execution halted
ERROR: lazy loading failed for package ‘GeneTonic’
* removing ‘/tmp/RtmpbQaCbz/Rinst256ad06a3f1553/GeneTonic’
      -----------------------------------
ERROR: package installation failed