| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-09-22 12:05 -0400 (Mon, 22 Sep 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4814 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4603 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4547 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4553 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 599/2333 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DMRcaller 1.41.2 (landing page) Nicolae Radu Zabet
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | ERROR | OK | ERROR | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | OK | ERROR | OK | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | ERROR | OK | ERROR | ||||||||||
|
To the developers/maintainers of the DMRcaller package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DMRcaller.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: DMRcaller |
| Version: 1.41.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL DMRcaller |
| StartedAt: 2025-09-21 15:16:50 -0400 (Sun, 21 Sep 2025) |
| EndedAt: 2025-09-21 15:16:59 -0400 (Sun, 21 Sep 2025) |
| EllapsedTime: 9.3 seconds |
| RetCode: 1 |
| Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL DMRcaller ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’ * installing *source* package ‘DMRcaller’ ... ** this is package ‘DMRcaller’ version ‘1.41.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ make: Nothing to be done for `all'. installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-DMRcaller/00new/DMRcaller/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for ‘DMRcaller’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-DMRcaller/00new/DMRcaller/libs/DMRcaller.so': dlopen(/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-DMRcaller/00new/DMRcaller/libs/DMRcaller.so, 0x0006): tried: '/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-DMRcaller/00new/DMRcaller/libs/DMRcaller.so' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64')), '/System/Volumes/Preboot/Cryptexes/OS/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-DMRcaller/00new/DMRcaller/libs/DMRcaller.so' (no such file), '/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-DMRcaller/00new/DMRcaller/libs/DMRcaller.so' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64')) Error: loading failed Execution halted ERROR: loading failed * removing ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/DMRcaller’