Multiple platform build/check report for BioC 3.9 experimental data

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:iontreeData.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings iontreeData_1.17.2.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.9-data-experiment/meat/iontreeData.Rcheck’
* using R Under development (unstable) (2018-10-16 r75448)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘iontreeData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘iontreeData’ version ‘1.17.2’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘iontreeData’ can be installed ... WARNING
Found the following significant warnings:
  Warning: Package 'iontreeData' is deprecated and will be removed from
See ‘/home/biocbuild/bbs-3.9-data-experiment/meat/iontreeData.Rcheck/00install.out’ for details.
* checking installed package size ... NOTE
  installed size is  9.3Mb
  sub-directories of 1Mb or more:
    data    1.4Mb
    mzxml   7.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: MS2RAW.Rd:14-15: Dropping empty section \details
prepare_Rd: MS2RAW.Rd:19-20: Dropping empty section \references
prepare_Rd: MS3RAW.Rd:14-15: Dropping empty section \details
prepare_Rd: MS3RAW.Rd:19-20: Dropping empty section \references
prepare_Rd: iontreeData-package.Rd:29-30: Dropping empty section \seealso
prepare_Rd: iontreeData-package.Rd:31-32: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
             old_size new_size compress
  MS2RAW.rda    1.1Mb    913Kb       xz
  MS3RAW.rda    274Kb    219Kb       xz
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 WARNINGs, 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.9-data-experiment/meat/iontreeData.Rcheck/00check.log’
for details.

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL iontreeData
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘iontreeData’ ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Warning: Package 'iontreeData' is deprecated and will be removed from
  Bioconductor version 3.9
* DONE (iontreeData)

name	user	system	elapsed
MS2RAW	0.034	0.004	0.047
MS3RAW	0.010	0.000	0.019

CHECK report for iontreeData on malbec2

Summary

Command output

Installation output

Tests output

Example timings