Back to Multiple platform build/check report for BioC 3.9
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

BUILD BIN report for igvR on tokay2

This page was generated on 2019-10-16 12:41:18 -0400 (Wed, 16 Oct 2019).

Package 799/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
igvR 1.4.0
Paul Shannon
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/igvR
Branch: RELEASE_3_9
Last Commit: 862aad9
Last Changed Date: 2019-05-02 11:54:11 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: igvR
Version: 1.4.0
Command: rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.4.0.tar.gz
StartedAt: 2019-10-16 09:28:11 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 09:28:59 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 48.2 seconds
RetCode: 0
Status:  OK  
PackageFile: igvR_1.4.0.zip
PackageFileSize: 3.655 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.4.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'igvR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'igvR'
    finding HTML links ... done
    DataFrameAnnotationTrack-class          html  
    DataFrameQuantitativeTrack-class        html  
    GRangesAnnotationTrack-class            html  
    GRangesQuantitativeTrack-class          html  
    GenomicAlignmentsTrack-class            html  
    QuantitativeTrack-class                 html  
    Track-class                             html  
    UCSCBedAnnotationTrack-class            html  
    UCSCBedGraphQuantitativeTrack-class     html  
    VariantTrack-class                      html  
    displayTrack                            html  
    getGenomicRegion                        html  
    getSupportedGenomes                     html  
    getTrackNames                           html  
    igvAnnotationTrack-class                html  
    igvR-class                              html  
    ping                                    html  
    removeTracksByName                      html  
    setGenome                               html  
    showGenomicRegion                       html  
    trackInfo                               html  
    trackSize-DataFrameAnnotationTrack-method
                                            html  
    trackSize-DataFrameQuantitativeTrack-method
                                            html  
    trackSize-GRangesAnnotationTrack-method
                                            html  
    trackSize-GRangesQuantitativeTrack-method
                                            html  
    trackSize-GenomicAlignmentTrack-method
                                            html  
    trackSize-UCSCBedAnnotationTrack-method
                                            html  
    trackSize-UCSCBedGraphQuantitativeTrack-method
                                            html  
    trackSize-VariantTrack-method           html  
    trackSize                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'igvR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'igvR' as igvR_1.4.0.zip
* DONE (igvR)