Renan Sauteraud
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/PING |
| Branch: RELEASE_3_9 |
| Last Commit: 452f807 |
| Last Changed Date: 2019-05-02 11:53:35 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:49:55 -0400 (Wed, 16 Oct 2019).
| Package 1215/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| PING 2.28.0 Renan Sauteraud
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | [ OK ] | |
| Package: PING |
| Version: 2.28.0 |
| Command: rm -rf PING.buildbin-libdir && mkdir PING.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh PING_2.28.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R PING.buildbin-libdir |
| StartedAt: 2019-10-16 09:08:26 -0400 (Wed, 16 Oct 2019) |
| EndedAt: 2019-10-16 09:09:51 -0400 (Wed, 16 Oct 2019) |
| EllapsedTime: 85.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: PING_2.28.0.tgz |
| PackageFileSize: 6.014 MiB |
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### Running command:
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### rm -rf PING.buildbin-libdir && mkdir PING.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh PING_2.28.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R PING.buildbin-libdir
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>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=PING.buildbin-libdir PING_2.28.0.tar.gz'
>>>>>>>
* installing *source* package ‘PING’ ...
** using staged installation
checking for pkg-config... /usr/local/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GSL... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ping.c -o ping.o
ping.c:321:10: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
if(abs(REAL(yF)[i]-mu[k]+delta[k]/2.)/sqrt(sF[k])>>>>>>
>>>>>>> FIXING LINKS FOR PING.buildbin-libdir/PING/libs//PING.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgcc_s.1.dylib" "PING.buildbin-libdir/PING/libs//PING.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgfortran.3.dylib" "PING.buildbin-libdir/PING/libs//PING.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.5.2.dylib" "PING.buildbin-libdir/PING/libs//PING.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.dylib" "PING.buildbin-libdir/PING/libs//PING.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libquadmath.0.dylib" "PING.buildbin-libdir/PING/libs//PING.so"