Martin Morgan
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/Organism.dplyr |
| Branch: RELEASE_3_9 |
| Last Commit: 8dd95fc |
| Last Changed Date: 2019-05-10 10:43:52 -0400 (Fri, 10 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:37:56 -0400 (Wed, 16 Oct 2019).
| Package 1151/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Organism.dplyr 1.12.1 Martin Morgan
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: Organism.dplyr |
| Version: 1.12.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Organism.dplyr_1.12.1.tar.gz && rm -rf Organism.dplyr.buildbin-libdir && mkdir Organism.dplyr.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Organism.dplyr.buildbin-libdir Organism.dplyr_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Organism.dplyr_1.12.1.zip && rm Organism.dplyr_1.12.1.tar.gz Organism.dplyr_1.12.1.zip |
| StartedAt: 2019-10-15 20:43:32 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:44:42 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 70.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Organism.dplyr_1.12.1.tar.gz && rm -rf Organism.dplyr.buildbin-libdir && mkdir Organism.dplyr.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Organism.dplyr.buildbin-libdir Organism.dplyr_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Organism.dplyr_1.12.1.zip && rm Organism.dplyr_1.12.1.tar.gz Organism.dplyr_1.12.1.zip
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install for i386
* installing *source* package 'Organism.dplyr' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Organism.dplyr'
finding HTML links ... done
Genomic-Extractors html
finding level-2 HTML links ... done
filter html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/filter.Rd:152: file link 'transcripts_tbl' in package 'Organism.dplyr' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/filter.Rd:155: file link 'select,src_organism-method' in package 'Organism.dplyr' does not exist and so has been treated as a topic
select html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/select.Rd:137: file link 'transcripts_tbl' in package 'Organism.dplyr' does not exist and so has been treated as a topic
src html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/src.Rd:126: file link 'transcripts_tbl' in package 'Organism.dplyr' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/src.Rd:129: file link 'select,src_organism-method' in package 'Organism.dplyr' does not exist and so has been treated as a topic
utils html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Organism.dplyr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Organism.dplyr' as Organism.dplyr_1.12.1.zip
* DONE (Organism.dplyr)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'Organism.dplyr' successfully unpacked and MD5 sums checked