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CHECK report for DepecheR on malbec2

This page was generated on 2019-10-16 12:17:39 -0400 (Wed, 16 Oct 2019).

Package 417/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DepecheR 1.0.3
Jakob Theorell
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/DepecheR
Branch: RELEASE_3_9
Last Commit: 5174d68
Last Changed Date: 2019-06-28 07:05:57 -0400 (Fri, 28 Jun 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  ERROR  OK 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DepecheR
Version: 1.0.3
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:DepecheR.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings DepecheR_1.0.3.tar.gz
StartedAt: 2019-10-16 01:06:04 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 01:08:05 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 120.8 seconds
RetCode: 0
Status:  OK 
CheckDir: DepecheR.Rcheck
Warnings: 0

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:DepecheR.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings DepecheR_1.0.3.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.9-bioc/meat/DepecheR.Rcheck’
* using R version 3.6.1 (2019-07-05)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘DepecheR/DESCRIPTION’ ... OK
* this is package ‘DepecheR’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘DepecheR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘BiocParallel’
  All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
File ‘/home/biocbuild/bbs-3.9-bioc/R/library/DepecheR/libs/DepecheR.so’:
  Found ‘rand’, possibly from ‘rand’ (C)
  Found ‘srand’, possibly from ‘srand’ (C)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs. The detected symbols are linked into the code but
might come from libraries and not actually be called.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.9-bioc/meat/DepecheR.Rcheck/00check.log’
for details.

Installation output

DepecheR.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL DepecheR
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘DepecheR’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I../inst/include -pthread -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c Clusterer.cpp -o Clusterer.o
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128>  { enum { value = true }; };
                                       ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128i> { enum { value = true }; };
                                        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128d> { enum { value = true }; };
                                        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef float  type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
                                           ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
                                           ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef int    type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
                                           ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7:   required from ‘class Eigen::Quaternion’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7:   required from ‘class Eigen::Quaternion’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:23:21:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:23:21:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:25:17:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:25:17:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7:   required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase, 1, -1, true>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, true, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, 1, -1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, 1, -1, true>’
Clusterer.cpp:42:25:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
Clusterer.cpp:52:44:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
Clusterer.cpp:56:67:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34:   required from ‘class Eigen::MapBase, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, -1, 1, false>’
Clusterer.cpp:58:24:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’
Clusterer.cpp:58:30:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, 1, -1, true>, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, 1, -1, true>, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65:   required from ‘class Eigen::Replicate, 1, -1, true>, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >’
Clusterer.cpp:58:67:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >’
Clusterer.cpp:58:67:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.cpp:62:20:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 1, -1, true>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase, 1, -1, true>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34:   required from ‘class Eigen::MapBase, 1, -1, true>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, true, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, 1, -1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, 1, -1, true>’
Clusterer.cpp:64:25:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1, -1, true> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 1, -1, true> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper, 1, -1, true> >’
Clusterer.cpp:104:45:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Array > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::Array > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, const Eigen::Array >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:104:51:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:104:51:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7:   required from ‘class Eigen::Array’
Clusterer.cpp:104:60:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:104:60:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7:   required from ‘class Eigen::MatrixWrapper, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
Clusterer.cpp:104:70:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:105:51:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:105:60:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7:   required from ‘class Eigen::MatrixWrapper, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
Clusterer.cpp:105:70:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > >’
Clusterer.cpp:107:55:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >’
Clusterer.cpp:107:56:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, true>, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, 1, -1, true>, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, 1, -1, true>, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65:   required from ‘class Eigen::Replicate, 1, -1, true>, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >’
Clusterer.cpp:159:54:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >’
Clusterer.cpp:159:54:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper, -1, 1, false> >’
Clusterer.cpp:193:34:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Array > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::Array > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, const Eigen::Array >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:193:36:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:193:36:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7:   required from ‘class Eigen::MatrixWrapper, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
Clusterer.cpp:193:52:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::internal::member_mean, 0>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::internal::member_mean, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::internal::member_mean, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr, Eigen::internal::member_mean, 0>’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::internal::member_mean, 0>, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::internal::member_mean, 0>, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::internal::member_mean, 0>, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65:   required from ‘class Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >’
Clusterer.cpp:202:43:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >’
Clusterer.cpp:247:28:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
Clusterer.cpp:271:58:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper >’
Clusterer.cpp:281:46:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:281:73:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7:   required from ‘class Eigen::Array’
Clusterer.cpp:281:77:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
Clusterer.cpp:281:77:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:281:93:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’
Clusterer.cpp:282:96:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’
Clusterer.cpp:282:96:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >’
Clusterer.cpp:282:97:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’
Clusterer.cpp:387:30:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’
Clusterer.cpp:387:30:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, true> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:352:102:   required from ‘struct Eigen::internal::plain_object_eval, 1, -1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:483:51:   required from ‘bool Eigen::DenseBase::isZero(const RealScalar&) const [with Derived = Eigen::Block, 1, -1, true>; Eigen::DenseBase::RealScalar = double]’
Clusterer.cpp:42:35:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   enum {
        ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43:   required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]’
Clusterer.cpp:202:58:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, true> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:69:8:   required from ‘class Eigen::internal::visitor_evaluator, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17:   required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::min_coeff_visitor, 1, -1, true> >; Derived = Eigen::Block, 1, -1, true>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:229:3:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::minCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::Block, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]’
Clusterer.cpp:64:47:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   enum {
        ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63:   required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; Eigen::internal::redux_impl::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; typename Eigen::internal::traits::Scalar = double]’
Clusterer.cpp:281:100:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   return internal::first_aligned::alignment),Derived>(m);
                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63:   required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >; Eigen::internal::redux_impl::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; typename Eigen::internal::traits::Scalar = double]’
Clusterer.cpp:282:104:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Matrix; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63:   required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator >; Eigen::internal::redux_impl::Scalar = int]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]’
Clusterer.cpp:331:27:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63:   required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > > >; Eigen::internal::redux_impl::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:22:   required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]’
Clusterer.cpp:202:58:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   enum {
        ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:131:44:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32:   required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103:   required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:40:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103:   required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:40:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103:   required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:40:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19:   required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:379:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103:   required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:40:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19:   required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:379:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43:   required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:99:1:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19:   required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:379:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43:   required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>; typename Eigen::NumTraits::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:99:1:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19:   required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:379:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43:   required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:34:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43:   required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true>; typename Eigen::NumTraits::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:34:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55:   required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39:   required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19:   required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:379:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   enum {
        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55:   required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39:   required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19:   required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:379:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_squaredNorm, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
Clusterer.cpp:159:79:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55:   required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39:   required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55:   required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39:   required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 1, -1, true> >; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31:   required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Functor = Eigen::internal::assign_op; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::internal::member_norm, 1>; Derived = Eigen::Block, -1, 1, false>]’
Clusterer.cpp:58:85:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7:   required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32:   required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39:   required from ‘class Eigen::internal::redux_evaluator, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:468:10:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::mean() const [with Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:105:1:   required from ‘ResultType Eigen::internal::member_mean::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, false>; ResultType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:40:   required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_mean; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:5:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32:   required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   enum {
        ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from Clusterer.cpp:14:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, 1, -1, true>; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63:   required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 1, -1, true> >; Eigen::internal::redux_impl::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:468:10:   required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::mean() const [with Derived = Eigen::Block, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:105:1:   required from ‘ResultType Eigen::internal::member_mean::operator()(const XprType&) const [with XprType = Eigen::Block, 1, -1, true>; ResultType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:40:   required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_mean; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:5:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32:   required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’
Clusterer.cpp:195:38:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   return internal::first_aligned::alignment),Derived>(m);
                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I../inst/include -pthread -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c InterfaceUtils.cpp -o InterfaceUtils.o
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128>  { enum { value = true }; };
                                       ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128i> { enum { value = true }; };
                                        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128d> { enum { value = true }; };
                                        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef float  type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
                                           ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
                                           ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef int    type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
                                           ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7:   required from ‘class Eigen::Quaternion’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7:   required from ‘class Eigen::Quaternion’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:23:21:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:23:21:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:25:17:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from Clusterer.h:14,
                 from InterfaceUtils.cpp:9:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
Clusterer.h:25:17:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
InterfaceUtils.cpp:26:49:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
InterfaceUtils.cpp:35:55:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
InterfaceUtils.cpp:37:52:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
InterfaceUtils.cpp:154:59:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I../inst/include -pthread -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128>  { enum { value = true }; };
                                       ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128i> { enum { value = true }; };
                                        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
 template<> struct is_arithmetic<__m128d> { enum { value = true }; };
                                        ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef float  type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
                                           ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
                                           ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 template<> struct unpacket_traits { typedef int    type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
                                           ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 struct palign_impl
                                   ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
 ptranspose(PacketBlock& kernel) {
                                  ^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
   template<> struct conj_helper {                                          \
                                                                      ^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
 EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7:   required from ‘class Eigen::Quaternion’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7:   required from ‘class Eigen::Quaternion’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
          bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
   typedef typename find_best_packet_helper::type>::type type;
                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
                      >::type PacketReturnType;
                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37:   required from ‘class Eigen::TransposeImpl, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36:   required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes]
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o DepecheR.so Clusterer.o InterfaceUtils.o RcppExports.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
if test -e "/usr/bin/strip" & test -e "/bin/uname" & [[ `uname` == "Linux" ]] ; then /usr/bin/strip --strip-debug DepecheR.so; fi
rm *.o
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-DepecheR/00new/DepecheR/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DepecheR)

Tests output

DepecheR.Rcheck/tests/testthat.Rout


R version 3.6.1 (2019-07-05) -- "Action of the Toes"
Copyright (C) 2019 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(DepecheR)
> 
> test_check("DepecheR")

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══ testthat results  ═══════════════════════════════════════════════════════════
[ OK: 23 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
> 
> proc.time()
   user  system elapsed 
  7.986   0.787  45.918

Example timings

DepecheR.Rcheck/DepecheR-Ex.timings

nameusersystemelapsed
dAllocate0.1810.0080.272
dColorPlot0.1620.0000.210
dColorVector0.1810.0040.282
dContours1.5620.0551.634
dDensityPlot0.1730.0000.175
dResidualPlot0.3590.0040.364
dScale0.3440.0320.416
dSplsda0.1840.0000.281
dViolins0.4300.0040.626
dWilcox0.1670.0040.288
depeche0.1870.0000.188