Arne Smits
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/DEP |
| Branch: RELEASE_3_9 |
| Last Commit: 7bd6eed |
| Last Changed Date: 2019-08-06 14:14:37 -0400 (Tue, 06 Aug 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:39:06 -0400 (Wed, 16 Oct 2019).
| Package 416/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DEP 1.6.1 Arne Smits
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: DEP |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DEP_1.6.1.tar.gz && rm -rf DEP.buildbin-libdir && mkdir DEP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEP.buildbin-libdir DEP_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DEP_1.6.1.zip && rm DEP_1.6.1.tar.gz DEP_1.6.1.zip |
| StartedAt: 2019-10-15 20:23:41 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:25:38 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 116.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DEP_1.6.1.tar.gz && rm -rf DEP.buildbin-libdir && mkdir DEP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEP.buildbin-libdir DEP_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DEP_1.6.1.zip && rm DEP_1.6.1.tar.gz DEP_1.6.1.zip
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install for i386
* installing *source* package 'DEP' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DEP'
finding HTML links ... done
DEP html
DiUbi html
DiUbi_ExpDesign html
LFQ html
TMT html
UbiLength html
UbiLength_ExpDesign html
add_rejections html
analyze_dep html
filter_missval html
filter_proteins html
get_df_long html
get_df_wide html
get_prefix html
get_results html
get_suffix html
import_IsobarQuant html
import_MaxQuant html
impute html
make_se html
make_se_parse html
make_unique html
manual_impute html
meanSdPlot html
normalize_vsn html
plot_all html
plot_cond html
plot_cond_freq html
plot_cond_overlap html
plot_cor html
plot_coverage html
plot_detect html
plot_dist html
plot_frequency html
plot_gsea html
plot_heatmap html
plot_imputation html
plot_missval html
plot_normalization html
plot_numbers html
plot_p_hist html
plot_pca html
plot_single html
plot_volcano html
process html
report html
run_app html
se2msn html
test_diff html
test_gsea html
theme_DEP1 html
theme_DEP2 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DEP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEP' as DEP_1.6.1.zip
* DONE (DEP)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'DEP' successfully unpacked and MD5 sums checked