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INSTALL report for strandCheckR on tokay1

This page was generated on 2019-04-13 11:29:32 -0400 (Sat, 13 Apr 2019).

Package 1519/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
strandCheckR 1.0.0
Thu-Hien To
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/strandCheckR
Branch: RELEASE_3_8
Last Commit: f2243a3
Last Changed Date: 2018-12-07 04:25:49 -0400 (Fri, 07 Dec 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  NA 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: strandCheckR
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/strandCheckR_1.0.0.tar.gz && rm -rf strandCheckR.buildbin-libdir && mkdir strandCheckR.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=strandCheckR.buildbin-libdir strandCheckR_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL strandCheckR_1.0.0.zip && rm strandCheckR_1.0.0.tar.gz strandCheckR_1.0.0.zip
StartedAt: 2019-04-12 20:01:50 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:02:51 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 60.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/strandCheckR_1.0.0.tar.gz && rm -rf strandCheckR.buildbin-libdir && mkdir strandCheckR.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=strandCheckR.buildbin-libdir strandCheckR_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL strandCheckR_1.0.0.zip && rm strandCheckR_1.0.0.tar.gz strandCheckR_1.0.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100  483k  100  483k    0     0  6724k      0 --:--:-- --:--:-- --:--:-- 7114k

install for i386

* installing *source* package 'strandCheckR' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'strandCheckR'
    finding HTML links ... done
    calculateStrandCoverage                 html  
    calculateStrandNbReads                  html  
    checkPairedEnd                          html  
    concatenateAlignments                   html  
    filterDNA                               html  
    getWinFromBamFile                       html  
    getWinFromGranges                       html  
    getWinFromIRanges                       html  
    finding level-2 HTML links ... done

    getWinFromReadInfo                      html  
    getWinOfAlignments                      html  
    intersectWithFeature                    html  
    keptProbaWin                            html  
    keptReadFragment                        html  
    plotHist                                html  
    plotWin                                 html  
    strandCheckR-package                    html  
    summarizeHist                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'strandCheckR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'strandCheckR' as strandCheckR_1.0.0.zip
* DONE (strandCheckR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'strandCheckR' successfully unpacked and MD5 sums checked
In R CMD INSTALL