Package: metahdep

Version: 1.40.0

Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL metahdep

StartedAt: 2019-04-15 17:57:40 -0400 (Mon, 15 Apr 2019)

EndedAt: 2019-04-15 17:57:44 -0400 (Mon, 15 Apr 2019)

EllapsedTime: 3.7 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL metahdep
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘metahdep’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c metahdep.c -o metahdep.o
In file included from metahdep.c:3:0:
metahdep.c: In function ‘get_row_indices2’:
/home/biocbuild/bbs-3.8-bioc/R/include/Rinternals.h:478:18: warning: passing argument 5 of ‘metan_binary_search_unique’ makes integer from pointer without a cast [-Wint-conversion]
 #define CHAR(x)  R_CHAR(x)
                  ^
metahdep.c:471:79: note: in expansion of macro ‘CHAR’
     index = metan_binary_search_unique(name_list, sort_index, R_old_names, j, CHAR(STRING_ELT(R_old_chipsets, j)), i);
                                                                               ^
metahdep.c:372:6: note: expected ‘char’ but argument is of type ‘const char *’
 SEXP metan_binary_search_unique(SEXP name_list, SEXP sort_index, SEXP gene_name, int gene_index, char chipset_name, int study_num)
      ^
gcc -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o metahdep.so metahdep.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/metahdep/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (metahdep)