Luigi Marchionni
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/RTopper |
| Branch: RELEASE_3_8 |
| Last Commit: 483ee0e |
| Last Changed Date: 2018-10-30 11:41:48 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:21:50 -0400 (Sat, 13 Apr 2019).
| Package 1365/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RTopper 1.28.0 Luigi Marchionni
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: RTopper |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/RTopper_1.28.0.tar.gz && rm -rf RTopper.buildbin-libdir && mkdir RTopper.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTopper.buildbin-libdir RTopper_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL RTopper_1.28.0.zip && rm RTopper_1.28.0.tar.gz RTopper_1.28.0.zip |
| StartedAt: 2019-04-12 18:45:31 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 18:46:14 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 43.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/RTopper_1.28.0.tar.gz && rm -rf RTopper.buildbin-libdir && mkdir RTopper.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTopper.buildbin-libdir RTopper_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL RTopper_1.28.0.zip && rm RTopper_1.28.0.tar.gz RTopper_1.28.0.zip
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install for i386
* installing *source* package 'RTopper' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RTopper'
finding HTML links ... done
RTopper-package html
adjustPvalGSE html
finding level-2 HTML links ... done
combineGSE html
computeDrStat html
convertToDr html
dat html
fgsList html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmp6L6yAq/R.INSTALL15b8262d4594/RTopper/man/fgsList.Rd:37: file link 'org.Hs.eg' in package 'org.Hs.eg.db' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmp6L6yAq/R.INSTALL15b8262d4594/RTopper/man/fgsList.Rd:41: file link 'GO' in package 'GO.db' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmp6L6yAq/R.INSTALL15b8262d4594/RTopper/man/fgsList.Rd:42: file link 'KEGG' in package 'KEGG.db' does not exist and so has been treated as a topic
gseResultsSep html
intScores html
pheno html
runBatchGSE html
sepScores html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'RTopper' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RTopper' as RTopper_1.28.0.zip
* DONE (RTopper)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'RTopper' successfully unpacked and MD5 sums checked
In R CMD INSTALL