| Back to Multiple platform build/check report for BioC 3.8 |
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This page was generated on 2019-04-13 11:27:51 -0400 (Sat, 13 Apr 2019).
| Package 1316/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RITAN 1.6.0 Michael Zimmermann
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: RITAN |
| Version: 1.6.0 |
| Command: rm -rf RITAN.buildbin-libdir && mkdir RITAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RITAN.buildbin-libdir RITAN_1.6.0.tar.gz |
| StartedAt: 2019-04-13 07:52:34 -0400 (Sat, 13 Apr 2019) |
| EndedAt: 2019-04-13 07:52:46 -0400 (Sat, 13 Apr 2019) |
| EllapsedTime: 12.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: RITAN_1.6.0.zip |
| PackageFileSize: 517.5 KiB |
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### Running command:
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### rm -rf RITAN.buildbin-libdir && mkdir RITAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RITAN.buildbin-libdir RITAN_1.6.0.tar.gz
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install for i386
* installing *source* package 'RITAN' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
** help
*** installing help indices
converting help for package 'RITAN'
finding HTML links ... done
as.graph html
check_any_net_input html
check_net_input html
enrichment_symbols html
geneset_overlap html
icon_test html
load_all_protein_coding_symbols html
load_geneset_symbols html
network_overlap html
plot.term_enrichment html
plot.term_enrichment_by_subset html
readGMT html
readSIF html
resource_reduce html
show_active_genesets_hist html
summary.term_enrichment html
summary.term_enrichment_by_subset html
term_enrichment html
term_enrichment_by_subset html
vac1.day0vs31.de.genes html
vac1.day0vs56.de.genes html
vac2.day0vs31.de.genes html
vac2.day0vs56.de.genes html
writeGMT html
write_simple_table html
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
In R CMD INSTALL
install for x64
* installing *source* package 'RITAN' ...
** testing if installed package can be loaded
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
* MD5 sums
packaged installation of 'RITAN' as RITAN_1.6.0.zip
* DONE (RITAN)
In R CMD INSTALL
In R CMD INSTALL