| Back to Multiple platform build/check report for BioC 3.8 |
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This page was generated on 2019-04-13 11:26:27 -0400 (Sat, 13 Apr 2019).
| Package 1135/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| PCAN 1.10.0 Matthew Page
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: PCAN |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/PCAN_1.10.0.tar.gz && rm -rf PCAN.buildbin-libdir && mkdir PCAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PCAN.buildbin-libdir PCAN_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL PCAN_1.10.0.zip && rm PCAN_1.10.0.tar.gz PCAN_1.10.0.zip |
| StartedAt: 2019-04-12 19:06:17 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:07:11 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 54.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/PCAN_1.10.0.tar.gz && rm -rf PCAN.buildbin-libdir && mkdir PCAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PCAN.buildbin-libdir PCAN_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL PCAN_1.10.0.zip && rm PCAN_1.10.0.tar.gz PCAN_1.10.0.zip
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install for i386
* installing *source* package 'PCAN' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'PCAN'
finding HTML links ... done
calcHpSim html
compareHPSets html
finding level-2 HTML links ... done
computeHpIC html
geneByHp html
geneByTrait html
geneDef html
hpByTrait html
hpDef html
hpGeneHeatmap html
hpGeneListComp html
hpSetCompBestMatch html
hpSetCompSummary html
hp_ancestors html
hp_class html
hp_descendants html
hqStrNw html
hsEntrezByRPath html
rPath html
traitDef html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'PCAN' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PCAN' as PCAN_1.10.0.zip
* DONE (PCAN)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'PCAN' successfully unpacked and MD5 sums checked
In R CMD INSTALL