Alina Selega
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/BUMHMM |
| Branch: RELEASE_3_8 |
| Last Commit: ab511e6 |
| Last Changed Date: 2019-01-04 13:20:55 -0400 (Fri, 04 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:22 -0400 (Sat, 13 Apr 2019).
| Package 185/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BUMHMM 1.6.1 Alina Selega
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: BUMHMM |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/BUMHMM_1.6.1.tar.gz && rm -rf BUMHMM.buildbin-libdir && mkdir BUMHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUMHMM.buildbin-libdir BUMHMM_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL BUMHMM_1.6.1.zip && rm BUMHMM_1.6.1.tar.gz BUMHMM_1.6.1.zip |
| StartedAt: 2019-04-12 19:39:06 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:40:03 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 57.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/BUMHMM_1.6.1.tar.gz && rm -rf BUMHMM.buildbin-libdir && mkdir BUMHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUMHMM.buildbin-libdir BUMHMM_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL BUMHMM_1.6.1.zip && rm BUMHMM_1.6.1.tar.gz BUMHMM_1.6.1.zip
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install for i386
* installing *source* package 'BUMHMM' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BUMHMM'
finding HTML links ... done
computeProbs html
finding level-2 HTML links ... done
computeStretches html
covFile html
docFile html
dorFile html
findPatternPos html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpk55rdg/R.INSTALL176446057da1/BUMHMM/man/findPatternPos.Rd:33: file link 'stri_locate_all_fixed' in package 'stringi' does not exist and so has been treated as a topic
nuclPerm html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpk55rdg/R.INSTALL176446057da1/BUMHMM/man/nuclPerm.Rd:19: file link 'permutations' in package 'gtools' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpk55rdg/R.INSTALL176446057da1/BUMHMM/man/nuclPerm.Rd:40: file link 'permutations' in package 'gtools' does not exist and so has been treated as a topic
scaleDOR html
se html
selectNuclPos html
seq html
stabiliseVariance html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'BUMHMM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BUMHMM' as BUMHMM_1.6.1.zip
* DONE (BUMHMM)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'BUMHMM' successfully unpacked and MD5 sums checked
In R CMD INSTALL