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INSTALL report for variancePartition on tokay2

This page was generated on 2018-10-17 08:40:54 -0400 (Wed, 17 Oct 2018).

Package 1530/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
variancePartition 1.10.4
Gabriel E. Hoffman
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/variancePartition
Branch: RELEASE_3_7
Last Commit: 4455edd
Last Changed Date: 2018-10-11 19:15:43 -0400 (Thu, 11 Oct 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: variancePartition
Version: 1.10.4
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/variancePartition_1.10.4.tar.gz && rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=variancePartition.buildbin-libdir variancePartition_1.10.4.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL variancePartition_1.10.4.zip && rm variancePartition_1.10.4.tar.gz variancePartition_1.10.4.zip
StartedAt: 2018-10-16 19:13:16 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:14:16 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 59.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/variancePartition_1.10.4.tar.gz && rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=variancePartition.buildbin-libdir variancePartition_1.10.4.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL variancePartition_1.10.4.zip && rm variancePartition_1.10.4.tar.gz variancePartition_1.10.4.zip
###
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install for i386

* installing *source* package 'variancePartition' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'eBayes' from package 'limma' in package 'variancePartition'
** help
*** installing help indices
  converting help for package 'variancePartition'
    finding HTML links ... done
    ESS-method                              html  
    MArrayLM2-class                         html  
    as.data.frame-varPartResults-method     html  
    as.matrix-varPartResults-method         html  
    calcVarPart-method                      html  
    canCorPairs                             html  
    colinearityScore                        html  
    dream-method                            html  
    eBayes-method                           html  
    extractVarPart                          html  
    fitExtractVarPartModel-method           html  
    fitVarPartModel-method                  html  
    getContrast-method                      html  
    getVarianceComponents                   html  
    ggColorHue                              html  
    plotCompareP-method                     html  
    plotCorrMatrix                          html  
    plotCorrStructure                       html  
    plotPercentBars                         html  
    plotStratify                            html  
    plotStratifyBy                          html  
    plotVarPart-method                      html  
    residuals-VarParFitList-method          html  
    sortCols-method                         html  
    sub-.MArrayLM2                          html  
    varPartConfInf                          html  
    varPartDEdata                           html  
    varPartData                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'variancePartition' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'variancePartition' as variancePartition_1.10.4.zip
* DONE (variancePartition)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'variancePartition' successfully unpacked and MD5 sums checked
In R CMD INSTALL