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BUILD BIN report for scone on tokay2

This page was generated on 2018-10-17 08:43:18 -0400 (Wed, 17 Oct 2018).

Package 1329/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scone 1.4.0
Michael Cole
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/scone
Branch: RELEASE_3_7
Last Commit: 6360243
Last Changed Date: 2018-04-30 10:35:44 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: scone
Version: 1.4.0
Command: rm -rf scone.buildbin-libdir && mkdir scone.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scone.buildbin-libdir scone_1.4.0.tar.gz
StartedAt: 2018-10-17 06:57:49 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:58:36 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 46.7 seconds
RetCode: 0
Status:  OK  
PackageFile: scone_1.4.0.zip
PackageFileSize: 727.6 KiB

Command output

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###
### Running command:
###
###   rm -rf scone.buildbin-libdir && mkdir scone.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scone.buildbin-libdir scone_1.4.0.tar.gz
###
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install for i386

* installing *source* package 'scone' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scone'
    finding HTML links ... done
    CLR_FN                                  html  
    DESEQ_FN                                html  
    FQ_FN                                   html  
    SCRAN_FN                                html  
    SUM_FN                                  html  
    SconeExperiment-class                   html  
    finding level-2 HTML links ... done

    TMM_FN                                  html  
    UQ_FN                                   html  
    biplot_color                            html  
    biplot_interactive                      html  
    control_genes                           html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpGujl0p/R.INSTALL10a45221721e/scone/man/control_genes.Rd:28: file link 'toupper' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpGujl0p/R.INSTALL10a45221721e/scone/man/control_genes.Rd:29: file link 'tolower' in package 'base' does not exist and so has been treated as a topic
    estimate_ziber                          html  
    factor_sample_filter                    html  
    fast_estimate_ziber                     html  
    get_bio                                 html  
    get_design                              html  
    get_negconruv                           html  
    get_normalized                          html  
    get_params                              html  
    get_qc                                  html  
    get_scores                              html  
    impute_expectation                      html  
    impute_null                             html  
    lm_adjust                               html  
    make_design                             html  
    metric_sample_filter                    html  
    scone                                   html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpGujl0p/R.INSTALL10a45221721e/scone/man/scone.Rd:101: file link 'bpparam' in package 'BiocParallel' does not exist and so has been treated as a topic
    sconeReport                             html  
    scone_easybake                          html  
    score_matrix                            html  
    select_methods                          html  
    simple_FNR_params                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'scone' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scone' as scone_1.4.0.zip
* DONE (scone)
In R CMD INSTALL
In R CMD INSTALL