Back to Multiple platform build/check report for BioC 3.7
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

INSTALL report for rexposome on tokay2

This page was generated on 2018-10-17 08:44:18 -0400 (Wed, 17 Oct 2018).

Package 1225/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rexposome 1.2.0
Carles Hernandez-Ferrer
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/rexposome
Branch: RELEASE_3_7
Last Commit: 11419ba
Last Changed Date: 2018-04-30 10:35:47 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: rexposome
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/rexposome_1.2.0.tar.gz && rm -rf rexposome.buildbin-libdir && mkdir rexposome.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rexposome.buildbin-libdir rexposome_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL rexposome_1.2.0.zip && rm rexposome_1.2.0.tar.gz rexposome_1.2.0.zip
StartedAt: 2018-10-16 20:22:46 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:24:29 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 103.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/rexposome_1.2.0.tar.gz && rm -rf rexposome.buildbin-libdir && mkdir rexposome.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rexposome.buildbin-libdir rexposome_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL rexposome_1.2.0.zip && rm rexposome_1.2.0.tar.gz rexposome_1.2.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 5210k  100 5210k    0     0  49.8M      0 --:--:-- --:--:-- --:--:-- 53.0M

install for i386

* installing *source* package 'rexposome' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rexposome'
    finding HTML links ... done
    ExWAS-class                             html  
    ExposomeClust-class                     html  
    ExposomeCorr-class                      html  
    finding level-2 HTML links ... done

    ExposomePCA-class                       html  
    ExposomeSet-class                       html  
    classification-methods                  html  
    clustering-methods                      html  
    correlation-methods                     html  
    ex_imp                                  html  
    expo                                    html  
    expo_c                                  html  
    expos-methods                           html  
    exposureNames-methods                   html  
    exwas-methods                           html  
    familyNames-methods                     html  
    highAndLow-methods                      html  
    ilod-methods                            html  
    imExposomeSet-class                     html  
    imputation-methods                      html  
    imputeLOD                               html  
    loadExposome                            html  
    loadImputed                             html  
    mExWAS-class                            html  
    me                                      html  
    mexwas-methods                          html  
    ndim-methods                            html  
    normalityTest-methods                   html  
    pca-methods                             html  
    phenotypeNames-methods                  html  
    plot3PCA-methods                        html  
    plotClassification-methods              html  
    plotCorrelation-methods                 html  
    plotEXP-methods                         html  
    plotEffect-methods                      html  
    plotExwas-methods                       html  
    plotFamily-methods                      html  
    plotHistogram-methods                   html  
    plotLOD-methods                         html  
    plotMissings-methods                    html  
    plotPCA-methods                         html  
    plotPHE-methods                         html  
    plotVolcano-methods                     html  
    readExposome                            html  
    rexposome                               html  
    standardize-methods                     html  
    tableLOD-methods                        html  
    tableMissings-methods                   html  
    tef-methods                             html  
    toES                                    html  
    trans-methods                           html  
    volcano_plot                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'rexposome' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rexposome' as rexposome_1.2.0.zip
* DONE (rexposome)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'rexposome' successfully unpacked and MD5 sums checked
In R CMD INSTALL