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BUILD BIN report for readat on tokay2

This page was generated on 2018-10-17 08:42:52 -0400 (Wed, 17 Oct 2018).

Package 1208/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
readat 1.6.0
Richard Cotton
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/readat
Branch: RELEASE_3_7
Last Commit: 21342e8
Last Changed Date: 2018-04-30 10:35:43 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: readat
Version: 1.6.0
Command: rm -rf readat.buildbin-libdir && mkdir readat.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=readat.buildbin-libdir readat_1.6.0.tar.gz
StartedAt: 2018-10-17 06:52:30 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:53:00 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 29.7 seconds
RetCode: 0
Status:  OK  
PackageFile: readat_1.6.0.zip
PackageFileSize: 3.167 MiB

Command output

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###
### Running command:
###
###   rm -rf readat.buildbin-libdir && mkdir readat.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=readat.buildbin-libdir readat_1.6.0.tar.gz
###
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install for i386

* installing *source* package 'readat' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'readat'
    finding HTML links ... done
    WideSomaLogicData                       html  
    WideSomaLogicDataAttributes             html  
    aptamers                                html  
    as.ExpressionSet                        html  
    as.SummarizedExperiment                 html  
    chromosomalPositions                    html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpwHfzpf/R.INSTALL12f0ac04fc4/readat/man/chromosomalPositions.Rd:7: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpwHfzpf/R.INSTALL12f0ac04fc4/readat/man/chromosomalPositions.Rd:8: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
    colnamesStartWithSeqId                  html  
    convertSeqIdToAptamer                   html  
    createSampleSubmission                  html  
    ensemblIds                              html  
    extractSampleData                       html  
    getChromosomalPositions                 html  
    getEnsemblIds                           html  
    getGoMolecularFunctions                 html  
    getKeggDefinitions                      html  
    getPfam                                 html  
    getSampleIdVar                          html  
    getSequencesWithLargestBetweenGroupVariation
                                            html  
    getUniProtKeywords                      html  
    goMolecularFunction                     html  
    isPass                                  html  
    isSomaEset                              html  
    keggDefinitions                         html  
    melt.WideSomaLogicData                  html  
    orderPlatePosition                      html  
    pfam                                    html  
    readAdat                                html  
    readComments                            html  
    readControls                            html  
    readFirstChar                           html  
    readSamples                             html  
    readSlides                              html  
    readat-defunct                          html  
    sub-.WideSomaLogicData                  html  
    uniprotKeywords                         html  
    writeSampleSubmissionForm               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'readat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'readat' as readat_1.6.0.zip
* DONE (readat)
In R CMD INSTALL
In R CMD INSTALL