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BUILD BIN report for isomiRs on tokay2

This page was generated on 2018-10-17 08:42:02 -0400 (Wed, 17 Oct 2018).

Package 758/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
isomiRs 1.8.0
Lorena Pantano
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/isomiRs
Branch: RELEASE_3_7
Last Commit: 02c5527
Last Changed Date: 2018-04-30 10:35:41 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: isomiRs
Version: 1.8.0
Command: rm -rf isomiRs.buildbin-libdir && mkdir isomiRs.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=isomiRs.buildbin-libdir isomiRs_1.8.0.tar.gz
StartedAt: 2018-10-17 06:35:43 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:36:42 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 59.7 seconds
RetCode: 0
Status:  OK  
PackageFile: isomiRs_1.8.0.zip
PackageFileSize: 6.926 MiB

Command output

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### Running command:
###
###   rm -rf isomiRs.buildbin-libdir && mkdir isomiRs.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=isomiRs.buildbin-libdir isomiRs_1.8.0.tar.gz
###
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install for i386

* installing *source* package 'isomiRs' ...
** R
** data
*** moving datasets to lazyload DB
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
** help
*** installing help indices
  converting help for package 'isomiRs'
    finding HTML links ... done
    IsomirDataSeq                           html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/IsomirDataSeq.Rd:10: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    IsomirDataSeqFromFiles                  html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/IsomirDataSeqFromFiles.Rd:41: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    counts                                  html  
    dat286.long                             html  
    design                                  html  
    ego                                     html  
    findTargets                             html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/findTargets.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/findTargets.Rd:14: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    gene_ex_rse                             html  
    isoCounts                               html  
    isoDE                                   html  
    isoNetwork                              html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/isoNetwork.Rd:12: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/isoNetwork.Rd:15: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/isoNetwork.Rd:24: file link 'AnnotationDb' in package 'AnnotationDbi' does not exist and so has been treated as a topic
    isoNorm                                 html  
    isoPLSDA                                html  
    isoPLSDAplot                            html  
    isoPlot                                 html  
    isoPlotNet                              html  
    isoPlotPosition                         html  
    isoSelect                               html  
    isoTop                                  html  
    isomiRs-deprecated                      html  
    isomiRs-package                         html  
    ma_ex                                   html  
    mirData                                 html  
    mirTritation                            html  
    mirna2targetscan                        html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpoDB00G/R.INSTALL9e0b1ce99/isomiRs/man/mirna2targetscan.Rd:13: file link 'AnnotationDb' in package 'AnnotationDbi' does not exist and so has been treated as a topic
    mirna_ex_rse                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
In R CMD INSTALL

install for x64

* installing *source* package 'isomiRs' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'isomiRs'
* MD5 sums
packaged installation of 'isomiRs' as isomiRs_1.8.0.zip
* DONE (isomiRs)
In R CMD INSTALL
In R CMD INSTALL