Jianqiang Sun
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/TCC |
| Branch: RELEASE_3_7 |
| Last Commit: 075b9fe |
| Last Changed Date: 2018-08-21 04:11:06 -0400 (Tue, 21 Aug 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:37:38 -0400 (Wed, 17 Oct 2018).
| Package 1466/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| TCC 1.20.1 Jianqiang Sun
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: TCC |
| Version: 1.20.1 |
| Command: rm -rf TCC.buildbin-libdir && mkdir TCC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCC.buildbin-libdir TCC_1.20.1.tar.gz |
| StartedAt: 2018-10-17 07:03:43 -0400 (Wed, 17 Oct 2018) |
| EndedAt: 2018-10-17 07:04:21 -0400 (Wed, 17 Oct 2018) |
| EllapsedTime: 38.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: TCC_1.20.1.zip |
| PackageFileSize: 1.902 MiB |
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### Running command:
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### rm -rf TCC.buildbin-libdir && mkdir TCC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCC.buildbin-libdir TCC_1.20.1.tar.gz
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install for i386
* installing *source* package 'TCC' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'calcNormFactors' in package 'TCC'
** help
*** installing help indices
converting help for package 'TCC'
finding HTML links ... done
ROKU html
TCC-class html
TCC html
WAD html
arab html
calcAUCValue html
calcNormFactors html
clusterSample html
estimateDE html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpagSXEC/R.INSTALL15fc605774e/TCC/man/estimateDE.Rd:66: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpagSXEC/R.INSTALL15fc605774e/TCC/man/estimateDE.Rd:73: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpagSXEC/R.INSTALL15fc605774e/TCC/man/estimateDE.Rd:81: file link 'getPriors.NB' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpagSXEC/R.INSTALL15fc605774e/TCC/man/estimateDE.Rd:128: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpagSXEC/R.INSTALL15fc605774e/TCC/man/estimateDE.Rd:152: file link 'getPriors.NB' in package 'baySeq' does not exist and so has been treated as a topic
filterLowCountGenes html
getNormalizedData html
getResult html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpagSXEC/R.INSTALL15fc605774e/TCC/man/getResult.Rd:20: file link 'plot' in package 'TCC' does not exist and so has been treated as a topic
hypoData html
hypoData_mg html
hypoData_ts html
makeFCMatrix html
nakai html
plot.TCC html
plotFCPseudocolor html
simulateReadCounts html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'TCC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCC' as TCC_1.20.1.zip
* DONE (TCC)
In R CMD INSTALL
In R CMD INSTALL