Ben Bolstad
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/BufferedMatrixMethods |
| Branch: RELEASE_3_7 |
| Last Commit: d5ef566 |
| Last Changed Date: 2018-04-30 10:35:06 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:21:56 -0400 (Wed, 17 Oct 2018).
| Package 173/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BufferedMatrixMethods 1.44.0 Ben Bolstad
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: BufferedMatrixMethods |
| Version: 1.44.0 |
| Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL BufferedMatrixMethods |
| StartedAt: 2018-10-15 17:59:18 -0400 (Mon, 15 Oct 2018) |
| EndedAt: 2018-10-15 17:59:23 -0400 (Mon, 15 Oct 2018) |
| EllapsedTime: 4.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL BufferedMatrixMethods
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* installing to library ‘/home/biocbuild/bbs-3.7-bioc/R/library’
* installing *source* package ‘BufferedMatrixMethods’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.7-bioc/R/library/BufferedMatrix/include" -I/usr/local/include -fpic -g -O2 -Wall -c init_package.c -o init_package.o
gcc -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.7-bioc/R/library/BufferedMatrix/include" -I/usr/local/include -fpic -g -O2 -Wall -c preprocess_bm.c -o preprocess_bm.o
preprocess_bm.c: In function ‘bm_rma_bg_correct’:
preprocess_bm.c:344:7: warning: unused variable ‘i’ [-Wunused-variable]
int i,j;
^
preprocess_bm.c: In function ‘R_bm_rma_bg_correct’:
preprocess_bm.c:378:7: warning: unused variable ‘current_mode’ [-Wunused-variable]
int current_mode;
^
preprocess_bm.c: In function ‘R_bm_quantile_normalize’:
preprocess_bm.c:593:7: warning: unused variable ‘current_mode’ [-Wunused-variable]
int current_mode;
^
preprocess_bm.c: In function ‘do_RMA_buffmat’:
preprocess_bm.c:924:7: warning: variable ‘first_ind’ set but not used [-Wunused-but-set-variable]
int first_ind;
^
preprocess_bm.c: In function ‘R_bm_rma_bg_correct_quantile_normalize’:
preprocess_bm.c:1151:7: warning: unused variable ‘current_mode’ [-Wunused-variable]
int current_mode;
^
preprocess_bm.c: At top level:
preprocess_bm.c:453:12: warning: ‘min’ defined but not used [-Wunused-function]
static int min(int x1,int x2){
^
gcc -shared -L/home/biocbuild/bbs-3.7-bioc/R/lib -L/usr/local/lib -o BufferedMatrixMethods.so init_package.o preprocess_bm.o -L/home/biocbuild/bbs-3.7-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.7-bioc/R/library/BufferedMatrixMethods/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (BufferedMatrixMethods)