Laurent Gatto
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/synapter |
| Branch: RELEASE_3_6 |
| Last Commit: 3c52d85 |
| Last Changed Date: 2017-10-30 12:39:44 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:21:54 -0400 (Thu, 12 Apr 2018).
| Package 1379/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| synapter 2.2.0 Laurent Gatto
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: synapter |
| Version: 2.2.0 |
| Command: rm -rf synapter.buildbin-libdir && mkdir synapter.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/synapter_2.2.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=synapter.buildbin-libdir --merge-multiarch synapter_2.2.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL synapter_2.2.0.zip && rm synapter_2.2.0.tar.gz synapter_2.2.0.zip |
| StartedAt: 2018-04-11 18:56:54 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:58:37 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 102.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf synapter.buildbin-libdir && mkdir synapter.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/synapter_2.2.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=synapter.buildbin-libdir --merge-multiarch synapter_2.2.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL synapter_2.2.0.zip && rm synapter_2.2.0.tar.gz synapter_2.2.0.zip
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install for i386
* installing *source* package 'synapter' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'synapter'
finding HTML links ... done
MasterFdrResults-class html
MasterPeptides-class html
Synapter html
finding level-2 HTML links ... done
createUniquePeptideDbRds html
defunct html
estimateMasterFdr html
inspectPeptideScores html
makeMaster html
plotCrossMatching html
requantify html
rescaleForTop3 html
synapter-package html
synapterGuide html
synapterPlgsAgreement html
synapterTinyData html
synergise html
synergise2 html
** building package indices
** installing vignettes
'fragmentmatching.Rmd' using 'UTF-8'
'synapter.Rmd' using 'UTF-8'
'synapter2.Rmd' using 'UTF-8'
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'synapter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'synapter' as synapter_2.2.0.zip
* DONE (synapter)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'synapter' successfully unpacked and MD5 sums checked
In R CMD INSTALL