Package: pcxn

Version: 2.0.0

Command: rm -rf pcxn.buildbin-libdir pcxn.Rcheck && mkdir pcxn.buildbin-libdir pcxn.Rcheck && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=pcxn.buildbin-libdir pcxn_2.0.0.tar.gz >pcxn.Rcheck\00install.out 2>&1 && cp pcxn.Rcheck\00install.out pcxn-install.out && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD check --library=pcxn.buildbin-libdir --install="check:pcxn-install.out" --force-multiarch --no-vignettes --timings pcxn_2.0.0.tar.gz

StartedAt: 2018-04-12 02:05:19 -0400 (Thu, 12 Apr 2018)

EndedAt: 2018-04-12 02:06:34 -0400 (Thu, 12 Apr 2018)

EllapsedTime: 74.9 seconds

RetCode: 0

Status:  OK

CheckDir: pcxn.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf pcxn.buildbin-libdir pcxn.Rcheck && mkdir pcxn.buildbin-libdir pcxn.Rcheck && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=pcxn.buildbin-libdir pcxn_2.0.0.tar.gz >pcxn.Rcheck\00install.out 2>&1 && cp pcxn.Rcheck\00install.out pcxn-install.out  &&  C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD check --library=pcxn.buildbin-libdir --install="check:pcxn-install.out" --force-multiarch --no-vignettes --timings pcxn_2.0.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.6-bioc/meat/pcxn.Rcheck'
* using R version 3.4.4 (2018-03-15)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'pcxn/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'pcxn' version '2.0.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'pcxn' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
             user system elapsed
pcxn-package   12   0.23   14.67
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
             user system elapsed
pcxn-package 9.22   0.27    9.48
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK

install for i386

* installing *source* package 'pcxn' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'pcxn'
    finding HTML links ... done
    pcxn-class                              html  
    pcxn-package                            html  
    pcxn_explore_analyze                    html  
    pcxn_gene_members                       html  
    pcxn_heatmap                            html  
    pcxn_network                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'pcxn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pcxn' as pcxn_2.0.0.zip
* DONE (pcxn)
In R CMD INSTALL
In R CMD INSTALL