| Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:30:46 -0400 (Thu, 12 Apr 2018).
| Package 975/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ontoProc 1.0.0 VJ Carey
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: ontoProc |
| Version: 1.0.0 |
| Command: rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ontoProc.buildbin-libdir --merge-multiarch ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.0.0.zip && rm ontoProc_1.0.0.tar.gz ontoProc_1.0.0.zip |
| StartedAt: 2018-04-11 18:26:59 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:28:06 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 66.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ontoProc.buildbin-libdir --merge-multiarch ontoProc_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.0.0.zip && rm ontoProc_1.0.0.tar.gz ontoProc_1.0.0.zip
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install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'ontoProc/vignettes/ontoProc.Rmd' to 'ontoProc/README.md'
* installing *source* package 'ontoProc' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'ontoProc'
finding HTML links ... done
TermSet-class html
allGOterms html
c-TermSet-method html
cellTypeToGO html
demoApp html
fastGrep html
getCellOnto html
makeSelectInput html
secLevGen html
siblings_TAG html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'ontoProc/vignettes/ontoProc.Rmd' to 'ontoProc/README.md'
* installing *source* package 'ontoProc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ontoProc' as ontoProc_1.0.0.zip
* DONE (ontoProc)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'ontoProc' successfully unpacked and MD5 sums checked
In R CMD INSTALL