Laurent Gautier
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/altcdfenvs |
| Branch: RELEASE_3_6 |
| Last Commit: 517a208 |
| Last Changed Date: 2017-10-30 12:39:01 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:17:29 -0400 (Thu, 12 Apr 2018).
| Package 38/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| altcdfenvs 2.40.0 Laurent Gautier
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: altcdfenvs |
| Version: 2.40.0 |
| Command: rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/altcdfenvs_2.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=altcdfenvs.buildbin-libdir --merge-multiarch altcdfenvs_2.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL altcdfenvs_2.40.0.zip && rm altcdfenvs_2.40.0.tar.gz altcdfenvs_2.40.0.zip |
| StartedAt: 2018-04-11 18:33:12 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:34:10 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 57.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/altcdfenvs_2.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=altcdfenvs.buildbin-libdir --merge-multiarch altcdfenvs_2.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL altcdfenvs_2.40.0.zip && rm altcdfenvs_2.40.0.tar.gz altcdfenvs_2.40.0.zip
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install for i386
* installing *source* package 'altcdfenvs' ...
** R
** data
** inst
** preparing package for lazy loading
NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
in method for 'toHypergraph' with signature '"CdfEnvAffy"': no definition for class "CdfEnvAffy"
** help
*** installing help indices
converting help for package 'altcdfenvs'
finding HTML links ... done
AffyProbesMatch-class html
CdfEnvAffy-class html
appendCdfEnvAffy html
buildCdfEnv.biostrings html
cdfenv html
cdfenvEx html
copyCdfEnvAffy html
countduplicated html
geneNames html
getxy.probeseq html
index2xy html
indexProbes.CdfEnvAffy html
matchAffyProbes html
plot.CdfEnvAffy html
removeIndex html
toHypergraph html
unique.CdfEnvAffy html
utils.FASTA html
validAffyBatch html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'altcdfenvs' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'altcdfenvs' as altcdfenvs_2.40.0.zip
* DONE (altcdfenvs)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'altcdfenvs' successfully unpacked and MD5 sums checked
In R CMD INSTALL