Nathan Sheffield
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/LOLA |
| Branch: RELEASE_3_6 |
| Last Commit: 0e9367e |
| Last Changed Date: 2017-10-30 12:40:54 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:26:48 -0400 (Thu, 12 Apr 2018).
| Package 757/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| LOLA 1.8.0 Nathan Sheffield
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: LOLA |
| Version: 1.8.0 |
| Command: rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/LOLA_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=LOLA.buildbin-libdir --merge-multiarch LOLA_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL LOLA_1.8.0.zip && rm LOLA_1.8.0.tar.gz LOLA_1.8.0.zip |
| StartedAt: 2018-04-11 18:39:05 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:40:24 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 79.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/LOLA_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=LOLA.buildbin-libdir --merge-multiarch LOLA_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL LOLA_1.8.0.zip && rm LOLA_1.8.0.tar.gz LOLA_1.8.0.zip
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install for i386
* installing *source* package 'LOLA' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'LOLA'
finding HTML links ... done
LOLA html
buildRestrictedUniverse html
checkUniverseAppropriateness html
cleanws html
countOverlapsAnyRev html
extractEnrichmentOverlaps html
getRegionFile html
getRegionSet html
lapplyAlias html
listRegionSets html
listToGRangesList html
loadRegionDB html
mergeRegionDBs html
nlist html
plotTopLOLAEnrichments html
readBed html
readCollection html
readCollectionAnnotation html
readCollectionFiles html
readRegionGRL html
readRegionSetAnnotation html
redefineUserSets html
replaceFileExtension html
runLOLA html
sampleGRL html
setLapplyAlias html
setSharedDataDir html
splitDataTable html
splitFileIntoCollection html
userSets html
userUniverse html
write.tsv html
writeCombinedEnrichment html
writeDataTableSplitByColumn html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'LOLA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LOLA' as LOLA_1.8.0.zip
* DONE (LOLA)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'LOLA' successfully unpacked and MD5 sums checked
In R CMD INSTALL