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BioC 3.6: INSTALL report for monocle on tokay1

This page was generated on 2017-08-16 13:32:49 -0400 (Wed, 16 Aug 2017).

Package 854/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
monocle 2.5.4
Cole Trapnell
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/monocle
Last Changed Rev: 131851 / Revision: 131943
Last Changed Date: 2017-08-08 11:45:40 -0400 (Tue, 08 Aug 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: monocle
Version: 2.5.4
Command: rm -rf monocle.buildbin-libdir && mkdir monocle.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/monocle_2.5.4.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=monocle.buildbin-libdir --merge-multiarch monocle_2.5.4.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL monocle_2.5.4.zip && rm monocle_2.5.4.tar.gz monocle_2.5.4.zip
StartedAt: 2017-08-15 18:13:59 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 18:20:01 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 362.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf monocle.buildbin-libdir && mkdir monocle.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/monocle_2.5.4.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=monocle.buildbin-libdir --merge-multiarch monocle_2.5.4.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL monocle_2.5.4.zip  && rm monocle_2.5.4.tar.gz monocle_2.5.4.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  3 16.2M    3  576k    0     0  17.4M      0 --:--:-- --:--:-- --:--:-- 18.7M
100 16.2M  100 16.2M    0     0  73.0M      0 --:--:-- --:--:-- --:--:-- 73.9M

install for i386

* installing *source* package 'monocle' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Warning: replacing previous import 'dplyr::union' by 'igraph::union' when loading 'monocle'
Warning: replacing previous import 'dplyr::groups' by 'igraph::groups' when loading 'monocle'
Warning: replacing previous import 'dplyr::as_data_frame' by 'igraph::as_data_frame' when loading 'monocle'
Warning: replacing previous import 'dplyr::arrange' by 'plyr::arrange' when loading 'monocle'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'dplyr::union' by 'igraph::union' when loading 'monocle'
Warning: replacing previous import 'dplyr::groups' by 'igraph::groups' when loading 'monocle'
Warning: replacing previous import 'dplyr::as_data_frame' by 'igraph::as_data_frame' when loading 'monocle'
Warning: replacing previous import 'dplyr::arrange' by 'plyr::arrange' when loading 'monocle'

install for x64

* installing *source* package 'monocle' ...
** testing if installed package can be loaded
Warning: replacing previous import 'dplyr::union' by 'igraph::union' when loading 'monocle'
Warning: replacing previous import 'dplyr::as_data_frame' by 'igraph::as_data_frame' when loading 'monocle'
Warning: replacing previous import 'dplyr::groups' by 'igraph::groups' when loading 'monocle'
Warning: replacing previous import 'dplyr::arrange' by 'plyr::arrange' when loading 'monocle'
* MD5 sums
packaged installation of 'monocle' as monocle_2.5.4.zip
* DONE (monocle)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'monocle' successfully unpacked and MD5 sums checked