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BioC 3.6: INSTALL report for altcdfenvs on tokay1

This page was generated on 2017-08-16 13:26:25 -0400 (Wed, 16 Aug 2017).

Package 38/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
altcdfenvs 2.39.0
Laurent Gautier
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/altcdfenvs
Last Changed Rev: 129129 / Revision: 131943
Last Changed Date: 2017-04-24 15:50:57 -0400 (Mon, 24 Apr 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: altcdfenvs
Version: 2.39.0
Command: rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/altcdfenvs_2.39.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=altcdfenvs.buildbin-libdir --merge-multiarch altcdfenvs_2.39.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL altcdfenvs_2.39.0.zip && rm altcdfenvs_2.39.0.tar.gz altcdfenvs_2.39.0.zip
StartedAt: 2017-08-15 18:23:21 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 18:23:56 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 35.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/altcdfenvs_2.39.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=altcdfenvs.buildbin-libdir --merge-multiarch altcdfenvs_2.39.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL altcdfenvs_2.39.0.zip  && rm altcdfenvs_2.39.0.tar.gz altcdfenvs_2.39.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 49220  100 49220    0     0  1268k      0 --:--:-- --:--:-- --:--:-- 1373k

install for i386

* installing *source* package 'altcdfenvs' ...
** R
** data
** inst
** preparing package for lazy loading
NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
in method for 'toHypergraph' with signature '"CdfEnvAffy"': no definition for class "CdfEnvAffy"
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'altcdfenvs' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'altcdfenvs' as altcdfenvs_2.39.0.zip
* DONE (altcdfenvs)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'altcdfenvs' successfully unpacked and MD5 sums checked