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BioC 3.5: BUILD BIN report for SGSeq on tokay2

This page was generated on 2017-08-16 13:23:54 -0400 (Wed, 16 Aug 2017).

Package 1209/1382HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SGSeq 1.10.0
Leonard Goldstein
Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/SGSeq
Last Changed Rev: 129126 / Revision: 131943
Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SGSeq
Version: 1.10.0
Command: cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.10.0.zip . & cd ../..
StartedAt: 2017-08-16 04:51:54 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 04:52:28 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 33.6 seconds
RetCode: 0
Status:  OK  
PackageFile: SGSeq_1.10.0.zip
PackageFileSize: 2.926 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.10.0.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (264 bytes security) (deflated 53%)
  adding: data/ (304 bytes security) (stored 0%)
  adding: data/Rdata.rdb (264 bytes security) (deflated 33%)
  adding: data/Rdata.rds (264 bytes security) (stored 0%)
  adding: data/Rdata.rdx (264 bytes security) (stored 0%)
  adding: DESCRIPTION (264 bytes security) (deflated 45%)
  adding: doc/ (304 bytes security) (stored 0%)
  adding: doc/index.html (264 bytes security) (deflated 58%)
  adding: doc/SGSeq.html (264 bytes security) (deflated 59%)
  adding: doc/SGSeq.R (264 bytes security) (deflated 79%)
  adding: doc/SGSeq.Rmd (264 bytes security) (deflated 67%)
  adding: extdata/ (304 bytes security) (stored 0%)
  adding: extdata/bams/ (304 bytes security) (stored 0%)
  adding: extdata/bams/N1.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/N1.bam.bai (264 bytes security) (deflated 99%)
  adding: extdata/bams/N2.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/N2.bam.bai (264 bytes security) (deflated 100%)
  adding: extdata/bams/N3.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/N3.bam.bai (264 bytes security) (deflated 99%)
  adding: extdata/bams/N4.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/N4.bam.bai (264 bytes security) (deflated 100%)
  adding: extdata/bams/T1.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/T1.bam.bai (264 bytes security) (deflated 100%)
  adding: extdata/bams/T2.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/T2.bam.bai (264 bytes security) (deflated 99%)
  adding: extdata/bams/T3.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/T3.bam.bai (264 bytes security) (deflated 99%)
  adding: extdata/bams/T4.bam (264 bytes security) (deflated 0%)
  adding: extdata/bams/T4.bam.bai (264 bytes security) (deflated 100%)
  adding: help/ (304 bytes security) (stored 0%)
  adding: help/aliases.rds (264 bytes security) (stored 0%)
  adding: help/AnIndex (264 bytes security) (deflated 84%)
  adding: help/paths.rds (264 bytes security) (stored 0%)
  adding: help/SGSeq.rdb (264 bytes security) (deflated 2%)
  adding: help/SGSeq.rdx (264 bytes security) (stored 0%)
  adding: html/ (304 bytes security) (stored 0%)
  adding: html/00Index.html (264 bytes security) (deflated 89%)
  adding: html/R.css (264 bytes security) (deflated 75%)
  adding: INDEX (264 bytes security) (deflated 69%)
  adding: MD5 (264 bytes security) (deflated 50%)
  adding: Meta/ (304 bytes security) (stored 0%)
  adding: Meta/data.rds (264 bytes security) (stored 0%)
  adding: Meta/features.rds (264 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
  adding: Meta/links.rds (264 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
  adding: Meta/package.rds (264 bytes security) (stored 0%)
  adding: Meta/Rd.rds (264 bytes security) (stored 0%)
  adding: Meta/vignette.rds (264 bytes security) (stored 0%)
  adding: NAMESPACE (264 bytes security) (deflated 65%)
  adding: NEWS (264 bytes security) (deflated 61%)
  adding: R/ (304 bytes security) (stored 0%)
  adding: R/SGSeq (264 bytes security) (deflated 41%)
  adding: R/SGSeq.rdb (264 bytes security) (deflated 21%)
  adding: R/SGSeq.rdx (264 bytes security) (deflated 1%)
  adding: scripts/ (304 bytes security) (stored 0%)
  adding: scripts/createExampleData.R (264 bytes security) (deflated 66%)
  adding: unitTests/ (304 bytes security) (stored 0%)
  adding: unitTests/test_analyzeFeatures.R (264 bytes security) (deflated 31%)
  adding: unitTests/test_analyzeVariants.R (264 bytes security) (deflated 21%)
  adding: unitTests/test_annotate.R (264 bytes security) (deflated 49%)
  adding: unitTests/test_classes.R (264 bytes security) (deflated 71%)
  adding: unitTests/test_convertToSGFeatures.R (264 bytes security) (deflated 25%)
  adding: unitTests/test_convertToTxFeatures.R (264 bytes security) (deflated 42%)
  adding: unitTests/test_findSGVariants.R (264 bytes security) (deflated 86%)
  adding: unitTests/test_getBamInfo.R (264 bytes security) (deflated 37%)
  adding: unitTests/test_getSGFeatureCounts.R (264 bytes security) (deflated 33%)
  adding: unitTests/test_getSGVariantCounts.R (264 bytes security) (deflated 55%)
  adding: unitTests/test_mergeTxFeatures.R (264 bytes security) (deflated 36%)
  adding: unitTests/test_predictTxFeatures.R (264 bytes security) (deflated 30%)
  adding: unitTests/test_predictVariantEffects.R (264 bytes security) (deflated 72%)