Build/check report for BioC 3.24 - CHECK results for graper on nebbiolo2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 RC (2026-04-17 r89917) -- "Because it was There"	4893
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo2

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.29.0

Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz

StartedAt: 2026-05-14 00:27:50 -0400 (Thu, 14 May 2026)

EndedAt: 2026-05-14 00:29:22 -0400 (Thu, 14 May 2026)

EllapsedTime: 92.2 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-14 04:27:50 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.29.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
  installed size is  6.2Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.29.0’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.795
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-591.876
ELB improved by 289.919

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-534.945
ELB improved by 56.9311

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.23
ELB improved by 39.7146

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.401
ELB improved by 20.829

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.822
ELB improved by 9.57894

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.412
ELB improved by 5.40965

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.848
ELB improved by 4.56471

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.291
ELB improved by 4.55702

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.923
ELB improved by 4.36781

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.296
ELB improved by 3.62642

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.748
ELB improved by 2.54831

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.148
ELB improved by 1.59986

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.158
ELB improved by 0.990266

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.502
ELB improved by 0.65585

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.024
ELB improved by 0.478086

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.645
ELB improved by 0.379

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.326
ELB improved by 0.319221

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.046
ELB improved by 0.280218

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.792
ELB improved by 0.253152

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.559
ELB improved by 0.233578

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.34
ELB improved by 0.21908

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.132
ELB improved by 0.208192

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.932
ELB improved by 0.199896

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.738
ELB improved by 0.19341

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.55
ELB improved by 0.188111

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.367
ELB improved by 0.183519

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.187
ELB improved by 0.179292

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.012
ELB improved by 0.175207

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.841
ELB improved by 0.17115

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.674
ELB improved by 0.167076

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.511
ELB improved by 0.162992

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.352
ELB improved by 0.158919

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.197
ELB improved by 0.154879

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.046
ELB improved by 0.150876

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.899
ELB improved by 0.146898

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.756
ELB improved by 0.142913

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.618
ELB improved by 0.138873

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.483
ELB improved by 0.134723

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.352
ELB improved by 0.130412

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.227
ELB improved by 0.125893

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.105
ELB improved by 0.121137

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.989
ELB improved by 0.116136

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.878
ELB improved by 0.110903

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.773
ELB improved by 0.105478

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.673
ELB improved by 0.0999224

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.579
ELB improved by 0.0943197

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.49
ELB improved by 0.0887693

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.406
ELB improved by 0.0833863

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.328
ELB improved by 0.0783008

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.255
ELB improved by 0.0736623

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.185
ELB improved by 0.0696486

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.118
ELB improved by 0.0664814

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.054
ELB improved by 0.0644447

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.99
ELB improved by 0.0638931

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.925
ELB improved by 0.0652136

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.856
ELB improved by 0.0686684

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.782
ELB improved by 0.0740547

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.702
ELB improved by 0.0803215

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.616
ELB improved by 0.0856729

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.528
ELB improved by 0.0885379

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.439
ELB improved by 0.0885254

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.353
ELB improved by 0.0861666

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.271
ELB improved by 0.0820406

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.194
ELB improved by 0.0764821

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.125
ELB improved by 0.0698043

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.062
ELB improved by 0.0624635

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.007
ELB improved by 0.0550089

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.959
ELB improved by 0.047953

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.917
ELB improved by 0.0416781

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.881
ELB improved by 0.0364068

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.849
ELB improved by 0.0322182

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.82
ELB improved by 0.0290866

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.793
ELB improved by 0.0269284

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.767
ELB improved by 0.0256454

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.742
ELB improved by 0.0251588

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.717
ELB improved by 0.0254364

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.69
ELB improved by 0.0265147

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.662
ELB improved by 0.0285242

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.63
ELB improved by 0.0317254

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.593
ELB improved by 0.0365621

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.55
ELB improved by 0.0437281

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.495
ELB improved by 0.0542063

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.426
ELB improved by 0.06912

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.337
ELB improved by 0.0890184

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.225
ELB improved by 0.112209

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.092
ELB improved by 0.133109

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.948
ELB improved by 0.144088

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.806
ELB improved by 0.14134

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.679
ELB improved by 0.127508

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.571
ELB improved by 0.108204

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.482
ELB improved by 0.0882612

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.412
ELB improved by 0.0704536

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.356
ELB improved by 0.0557992

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.312
ELB improved by 0.0443172

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.276
ELB improved by 0.0355874

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.247
ELB improved by 0.0290531

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.223
ELB improved by 0.0241789

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.203
ELB improved by 0.0205215

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.185
ELB improved by 0.0177439

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.169
ELB improved by 0.0156008

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.155
ELB improved by 0.0139165

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.143
ELB improved by 0.0125662

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.131
ELB improved by 0.011461

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.121
ELB improved by 0.0105378

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.111
ELB improved by 0.00975181

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.847
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.37
ELB improved by 291.477

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.956
ELB improved by 56.4139

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.899
ELB improved by 38.0566

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.679
ELB improved by 19.2205

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.304
ELB improved by 8.37475

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.071
ELB improved by 4.23325

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.165
ELB improved by 2.9051

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.715
ELB improved by 2.45059

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.393
ELB improved by 2.32174

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.068
ELB improved by 2.32509

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.687
ELB improved by 2.38069

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.253
ELB improved by 2.43407

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.839
ELB improved by 2.41384

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.616
ELB improved by 2.22342

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.787
ELB improved by 1.82868

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.444
ELB improved by 1.34335

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.53
ELB improved by 0.913509

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.926
ELB improved by 0.603948

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.52
ELB improved by 0.406495

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.233
ELB improved by 0.287263

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.017
ELB improved by 0.215533

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.846
ELB improved by 0.170997

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.704
ELB improved by 0.141949

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.582
ELB improved by 0.121999

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.475
ELB improved by 0.107647

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.378
ELB improved by 0.0969111

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.289
ELB improved by 0.0886119

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.207
ELB improved by 0.0820122

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.13
ELB improved by 0.0766306

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.058
ELB improved by 0.0721409

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.99
ELB improved by 0.068316

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.925
ELB improved by 0.0649936

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.863
ELB improved by 0.0620561

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.804
ELB improved by 0.059417

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.747
ELB improved by 0.0570121

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.692
ELB improved by 0.0547937

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.639
ELB improved by 0.052726

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.588
ELB improved by 0.0507828

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.539
ELB improved by 0.0489449

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.492
ELB improved by 0.047199

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.447
ELB improved by 0.0455357

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.403
ELB improved by 0.0439495

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.36
ELB improved by 0.0424373

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.319
ELB improved by 0.0409986

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.28
ELB improved by 0.0396344

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.241
ELB improved by 0.0383477

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.204
ELB improved by 0.0371434

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.168
ELB improved by 0.0360289

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.133
ELB improved by 0.0350149

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.099
ELB improved by 0.0341172

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.065
ELB improved by 0.0333588

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.033
ELB improved by 0.0327736

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413
ELB improved by 0.0324129

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.968
ELB improved by 0.032354

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.935
ELB improved by 0.0327166

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.902
ELB improved by 0.0336873

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.866
ELB improved by 0.0355608

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.827
ELB improved by 0.0387975

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.783
ELB improved by 0.0440895

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.731
ELB improved by 0.052379

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.666
ELB improved by 0.0646882

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.584
ELB improved by 0.0816316

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.481
ELB improved by 0.102974

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.353
ELB improved by 0.128202

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.196
ELB improved by 0.157216

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.008
ELB improved by 0.187924

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.794
ELB improved by 0.214071

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.562
ELB improved by 0.231661

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.317
ELB improved by 0.245584

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.053
ELB improved by 0.263945

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.763
ELB improved by 0.29004

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.443
ELB improved by 0.319439

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.101
ELB improved by 0.342657

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.746
ELB improved by 0.354772

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.387
ELB improved by 0.358936

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.028
ELB improved by 0.359192

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.671
ELB improved by 0.356994

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.318
ELB improved by 0.352516

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.973
ELB improved by 0.34554

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.637
ELB improved by 0.335618

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.315
ELB improved by 0.3223

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.009
ELB improved by 0.305522

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.723
ELB improved by 0.28588

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.459
ELB improved by 0.26458

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.216
ELB improved by 0.243117

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.993
ELB improved by 0.222826

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.788
ELB improved by 0.204405

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.601
ELB improved by 0.187532

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.43
ELB improved by 0.170991

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.276
ELB improved by 0.153655

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.141
ELB improved by 0.135598

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.023
ELB improved by 0.118

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.921
ELB improved by 0.102077

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.832
ELB improved by 0.0883969

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.755
ELB improved by 0.0769511

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.688
ELB improved by 0.0674775

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.628
ELB improved by 0.0596801

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.575
ELB improved by 0.0533154

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.527
ELB improved by 0.0482146

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.482
ELB improved by 0.0442893

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.441
ELB improved by 0.0415461

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.401
ELB improved by 0.0401229

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.36
ELB improved by 0.0403622

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.317
ELB improved by 0.0429386

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.268
ELB improved by 0.049023

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.208
ELB improved by 0.0602884

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.13
ELB improved by 0.0779803

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.03
ELB improved by 0.0997147

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.914
ELB improved by 0.116031

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.798
ELB improved by 0.116789

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.693
ELB improved by 0.104276

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.605
ELB improved by 0.0886601

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.529
ELB improved by 0.0755991

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.463
ELB improved by 0.0657606

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.405
ELB improved by 0.0583782

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.352
ELB improved by 0.0526355

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.304
ELB improved by 0.0478784

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.261
ELB improved by 0.0436443

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.221
ELB improved by 0.0396854

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.185
ELB improved by 0.0359698

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.152
ELB improved by 0.0326432

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.122
ELB improved by 0.0299729

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.094
ELB improved by 0.0283203

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.066
ELB improved by 0.0281935

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.035
ELB improved by 0.0304401

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.999
ELB improved by 0.036666

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.949
ELB improved by 0.0499447

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.874
ELB improved by 0.0752125

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.758
ELB improved by 0.115546

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.6
ELB improved by 0.157893

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.431
ELB improved by 0.169496

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.288
ELB improved by 0.142348

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.184
ELB improved by 0.104071

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.11
ELB improved by 0.0740391

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.055
ELB improved by 0.0550655

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.01
ELB improved by 0.04475

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.969
ELB improved by 0.0409424

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.926
ELB improved by 0.0431082

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.873
ELB improved by 0.0529461

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.798
ELB improved by 0.075447

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.679
ELB improved by 0.119136

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.492
ELB improved by 0.187009

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.239
ELB improved by 0.252938

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.958
ELB improved by 0.281251

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.671
ELB improved by 0.286332

iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.373
ELB improved by 0.29804

iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.061
ELB improved by 0.312634

iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.799
ELB improved by 0.261917

iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.639
ELB improved by 0.159778

iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.53
ELB improved by 0.109005

iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.43
ELB improved by 0.0996003

iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.318
ELB improved by 0.112038

iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.163
ELB improved by 0.155536

iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.915
ELB improved by 0.247396

iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.555
ELB improved by 0.360027

iteration 157
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.18
ELB improved by 0.375737

iteration 158
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.898
ELB improved by 0.28136

iteration 159
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.713
ELB improved by 0.184874

iteration 160
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.595
ELB improved by 0.11854

iteration 161
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.522
ELB improved by 0.0731631

iteration 162
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.479
ELB improved by 0.0425711

iteration 163
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.455
ELB improved by 0.024305

iteration 164
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.44
ELB improved by 0.0144328

iteration 165
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.431
ELB improved by 0.00918578

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.873
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.528
ELB improved by 284.345

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.5
ELB improved by 57.0284

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.611
ELB improved by 40.8894

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.636
ELB improved by 19.9748

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.573
ELB improved by 9.06237

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.288
ELB improved by 5.28569

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.374
ELB improved by 3.9139

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.834
ELB improved by 3.53971

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.287
ELB improved by 3.54735

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.641
ELB improved by 3.64581

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.007
ELB improved by 3.6339

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.641
ELB improved by 3.36623

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.816
ELB improved by 2.82521

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.661
ELB improved by 2.15513

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.095
ELB improved by 1.56574

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.93
ELB improved by 1.1646

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.003
ELB improved by 0.927272

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.225
ELB improved by 0.77761

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.564
ELB improved by 0.661682

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.994
ELB improved by 0.569221

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.494
ELB improved by 0.500371

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.044
ELB improved by 0.450067

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.631
ELB improved by 0.412857

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.246
ELB improved by 0.38462

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.884
ELB improved by 0.36205

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.542
ELB improved by 0.342568

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.217
ELB improved by 0.324507

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.91
ELB improved by 0.307206

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.619
ELB improved by 0.29076

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.344
ELB improved by 0.275502

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.082
ELB improved by 0.261607

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.833
ELB improved by 0.249044

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.596
ELB improved by 0.23769

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.368
ELB improved by 0.227422

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.15
ELB improved by 0.218152

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.94
ELB improved by 0.209811

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.738
ELB improved by 0.202342

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.542
ELB improved by 0.195692

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.352
ELB improved by 0.189818

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.168
ELB improved by 0.184689

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.987
ELB improved by 0.180281

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.811
ELB improved by 0.176577

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.637
ELB improved by 0.173543

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.466
ELB improved by 0.171111

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.297
ELB improved by 0.169153

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.129
ELB improved by 0.167461

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.964
ELB improved by 0.165749

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.8
ELB improved by 0.163671

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.639
ELB improved by 0.160862

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.482
ELB improved by 0.15699

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.33
ELB improved by 0.151801

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.185
ELB improved by 0.145162

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.048
ELB improved by 0.137073

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.921
ELB improved by 0.127676

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.803
ELB improved by 0.117235

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.697
ELB improved by 0.106107

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.602
ELB improved by 0.0946959

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.519
ELB improved by 0.083406

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.446
ELB improved by 0.0725952

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.384
ELB improved by 0.0625448

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.33
ELB improved by 0.0534437

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.285
ELB improved by 0.0453898

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.247
ELB improved by 0.0384023

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.214
ELB improved by 0.0324405

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.187
ELB improved by 0.0274235

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.164
ELB improved by 0.0232479

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.144
ELB improved by 0.0198018

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.127
ELB improved by 0.0169749

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.112
ELB improved by 0.0146644

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.099
ELB improved by 0.0127788

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.088
ELB improved by 0.0112393

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.078
ELB improved by 0.00997929

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-843.009
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.496
ELB improved by 261.513

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.136
ELB improved by 59.3599

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.674
ELB improved by 42.4625

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.987
ELB improved by 21.6864

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.274
ELB improved by 9.71318

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.952
ELB improved by 5.32144

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.529
ELB improved by 4.42362

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.275
ELB improved by 4.25398

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.087
ELB improved by 4.18783

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.042
ELB improved by 4.0451

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.284
ELB improved by 3.75839

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.945
ELB improved by 3.33818

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.125
ELB improved by 2.81994

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.874
ELB improved by 2.25105

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.156
ELB improved by 1.71795

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.883
ELB improved by 1.2732

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.951
ELB improved by 0.93194

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.243
ELB improved by 0.708518

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.66
ELB improved by 0.582413

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.156
ELB improved by 0.504702

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.718
ELB improved by 0.438031

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.343
ELB improved by 0.374642

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.02
ELB improved by 0.322874

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.735
ELB improved by 0.285198

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.48
ELB improved by 0.255289

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.253
ELB improved by 0.226169

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.058
ELB improved by 0.195589

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.893
ELB improved by 0.165184

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.755
ELB improved by 0.137307

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.642
ELB improved by 0.113486

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.548
ELB improved by 0.0942369

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.468
ELB improved by 0.0792463

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.401
ELB improved by 0.0677278

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.342
ELB improved by 0.0588022

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.29
ELB improved by 0.0517276

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.244
ELB improved by 0.0459637

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.203
ELB improved by 0.0411464

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.166
ELB improved by 0.0370372

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.133
ELB improved by 0.0334787

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.102
ELB improved by 0.0303638

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.075
ELB improved by 0.0276161

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.049
ELB improved by 0.0251785

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.026
ELB improved by 0.0230065

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.005
ELB improved by 0.0210644

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.986
ELB improved by 0.0193225

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.968
ELB improved by 0.0177561

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.952
ELB improved by 0.0163441

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.937
ELB improved by 0.0150685

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.923
ELB improved by 0.013914

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.91
ELB improved by 0.0128669

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.898
ELB improved by 0.0119156

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.887
ELB improved by 0.01105

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.877
ELB improved by 0.010261

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.867
ELB improved by 0.00954084

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.491   0.193   2.674

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.053	0.013	0.065
getPIPs	0.078	0.016	0.094
graper	0.079	0.005	0.084
makeExampleData	0.009	0.001	0.010
makeExampleDataWithUnequalGroups	0.010	0.001	0.011
plotELBO	0.302	0.014	0.317
plotGroupPenalties	0.948	0.003	0.951
plotPosterior	0.646	0.001	0.647
predict.graper	2.065	0.012	2.077
print.graper	0.047	0.005	0.052