Peter Hickey
| Snapshot Date: 2026-04-08 06:30 -0400 (Wed, 08 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/OSCA.workflows |
| git_branch: devel |
| git_last_commit: e45c85f |
| git_last_commit_date: 2025-10-29 10:12:59 -0400 (Wed, 29 Oct 2025) |
| Back to Books build report for BioC 3.23 |
This page was generated on 2026-04-08 14:30 -0400 (Wed, 08 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.6.0 alpha (2026-04-05 r89794) | 4898 |
| lconway | macOS 12.7.6 Monterey | x86_64 | R Under development (unstable) (2026-03-25 r89703) -- "Unsuffered Consequences" | 975 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 9/11 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| OSCA.workflows 1.19.0 (landing page) Peter Hickey
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | |||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | ERROR | ERROR | skipped | |||||||||
|
To the developers/maintainers of the OSCA.workflows package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: OSCA.workflows |
| Version: 1.19.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.workflows |
| StartedAt: 2026-04-08 06:47:47 -0400 (Wed, 08 Apr 2026) |
| EndedAt: 2026-04-08 06:48:04 -0400 (Wed, 08 Apr 2026) |
| EllapsedTime: 17.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.workflows
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* checking for file ‘OSCA.workflows/DESCRIPTION’ ... OK
* preparing ‘OSCA.workflows’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
-----------------------------------
* installing *source* package ‘OSCA.workflows’ ...
** this is package ‘OSCA.workflows’ version ‘1.19.0’
** using staged installation
** inst
** help
No man pages found in package ‘OSCA.workflows’
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for 'scPCA' in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/data.table/libs/data_table.so':
dlopen(/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/data.table/libs/data_table.so
Expected in: <528FF630-5F80-3B2B-BB67-7A543E4B0079> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
Error : package 'scPCA' could not be loaded
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/private/tmp/Rtmp62lyGx/Rinstcf96657d6f3d/OSCA.workflows’
-----------------------------------
ERROR: package installation failed