Back to Rapid builds (Linux only) of a subset of BioC 3.23
Report updated every 6 hours

This page was generated on 2025-12-10 13:07 -0500 (Wed, 10 Dec 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences" 925
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 202/230HostnameOS / ArchINSTALLBUILDCHECK
siggenes 1.85.0  (landing page)
Holger Schwender
Snapshot Date: 2025-12-10 12:00 -0500 (Wed, 10 Dec 2025)
git_url: https://git.bioconductor.org/packages/siggenes
git_branch: devel
git_last_commit: d3b5d6f
git_last_commit_date: 2025-10-29 09:53:36 -0500 (Wed, 29 Oct 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped


BUILD results for siggenes on teran2

To the developers/maintainers of the siggenes package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: siggenes
Version: 1.85.0
Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data siggenes
StartedAt: 2025-12-10 12:38:21 -0500 (Wed, 10 Dec 2025)
EndedAt: 2025-12-10 12:38:30 -0500 (Wed, 10 Dec 2025)
EllapsedTime: 9.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data siggenes
###
##############################################################################
##############################################################################


* checking for file ‘siggenes/DESCRIPTION’ ... OK
* preparing ‘siggenes’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
      -----------------------------------
* installing *source* package ‘siggenes’ ...
** this is package ‘siggenes’ version ‘1.85.0’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
Error in base::serialize(base::as.list(base::getNamespace("siggenes"),  : 
  error writing to connection
Calls: <Anonymous> -> withCallingHandlers -> <Anonymous>
Execution halted
ERROR: loading failed
* removing ‘/tmp/Rtmp8Adbzj/Rinst2c0aed3db93703/siggenes’
      -----------------------------------
ERROR: package installation failed