| Back to Rapid builds (Linux only) of a subset of BioC 3.23 Report updated every 6 hours |
This page was generated on 2025-12-09 13:17 -0500 (Tue, 09 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences" | 925 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 4/230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
| affyPLM 1.87.0 (landing page) Ben Bolstad
| teran2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||
|
To the developers/maintainers of the affyPLM package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: affyPLM |
| Version: 1.87.0 |
| Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data affyPLM |
| StartedAt: 2025-12-09 12:24:05 -0500 (Tue, 09 Dec 2025) |
| EndedAt: 2025-12-09 12:24:06 -0500 (Tue, 09 Dec 2025) |
| EllapsedTime: 1.6 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data affyPLM
###
##############################################################################
##############################################################################
* checking for file ‘affyPLM/DESCRIPTION’ ... OK
* preparing ‘affyPLM’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package (it is needed to build vignettes)
-----------------------------------
* installing *source* package ‘affyPLM’ ...
** this is package ‘affyPLM’ version ‘1.87.0’
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
gcc -std=gnu2x -I"/home/rapidbuild/bbs-3.23-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c LESN.c -o LESN.o
gcc -std=gnu2x -I"/home/rapidbuild/bbs-3.23-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c PLM_avg_log.c -o PLM_avg_log.o
PLM_avg_log.c:91:1: fatal error: error writing to /tmp/ccw8kSVa.s: No space left on device
91 | }
| ^
compilation terminated.
make: *** [/home/rapidbuild/bbs-3.23-bioc-rapid/R/etc/Makeconf:202: PLM_avg_log.o] Error 1
ERROR: compilation failed for package ‘affyPLM’
* removing ‘/tmp/Rtmp8nWKUr/Rinst1f9d42625d89f0/affyPLM’
-----------------------------------
ERROR: package installation failed