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This page was generated on 2025-11-13 11:32 -0500 (Thu, 13 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4013
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1911/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scone 1.35.0  (landing page)
Davide Risso
Snapshot Date: 2025-11-12 13:40 -0500 (Wed, 12 Nov 2025)
git_url: https://git.bioconductor.org/packages/scone
git_branch: devel
git_last_commit: 60f7f37
git_last_commit_date: 2025-10-29 10:36:05 -0500 (Wed, 29 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    ERROR  skippedskipped

BUILD results for scone on kjohnson3

To the developers/maintainers of the scone package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scone.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: scone
Version: 1.35.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data scone
StartedAt: 2025-11-12 17:10:10 -0500 (Wed, 12 Nov 2025)
EndedAt: 2025-11-12 17:10:11 -0500 (Wed, 12 Nov 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data scone
###
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* checking for file ‘scone/DESCRIPTION’ ... OK
* preparing ‘scone’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
      -----------------------------------
ERROR: dependencies ‘edgeR’, ‘rhdf5’, ‘RUVSeq’ are not available for package ‘scone’
Perhaps try a variation of:
install.packages(c('edgeR', 'rhdf5', 'RUVSeq'))
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/Rtmpy17o2B/Rinst78545d92d471/scone’
      -----------------------------------
ERROR: package installation failed