Multiple platform build/check report for BioC 3.23 - BUILD results for memes on kjohnson3

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences"	4719
kjohnson3	macOS 13.7.7 Ventura	arm64	R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences"	2847
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for memes on kjohnson3

To the developers/maintainers of the memes package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/memes.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: memes

Version: 1.19.1

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data memes

StartedAt: 2026-03-10 15:29:41 -0400 (Tue, 10 Mar 2026)

EndedAt: 2026-03-10 15:29:55 -0400 (Tue, 10 Mar 2026)

EllapsedTime: 13.2 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data memes
###
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* checking for file ‘memes/DESCRIPTION’ ... OK
* preparing ‘memes’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘core_ame.Rmd’ using rmarkdown
--- finished re-building ‘core_ame.Rmd’

--- re-building ‘core_dreme.Rmd’ using rmarkdown
--- finished re-building ‘core_dreme.Rmd’

--- re-building ‘core_fimo.Rmd’ using rmarkdown
--- finished re-building ‘core_fimo.Rmd’

--- re-building ‘core_tomtom.Rmd’ using rmarkdown
2026-03-10 15:29:51.912 R[93072:125279499] XType: Using static font registry.
--- finished re-building ‘core_tomtom.Rmd’

--- re-building ‘install_guide.Rmd’ using rmarkdown
--- finished re-building ‘install_guide.Rmd’

--- re-building ‘integrative_analysis.Rmd’ using rmarkdown
--- finished re-building ‘integrative_analysis.Rmd’

--- re-building ‘tidy_motifs.Rmd’ using rmarkdown

Quitting from tidy_motifs.Rmd:40-43 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'MotifDb'
---
Backtrace:
    ▆
 1. ├─MotifDb::MotifDb %>% MotifDb::query("FlyFactorSurvey")
 2. └─base::loadNamespace(x)
 3.   └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
 4.     └─base (local) withOneRestart(expr, restarts[[1L]])
 5.       └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'tidy_motifs.Rmd' failed with diagnostics:
there is no package called 'MotifDb'
--- failed re-building ‘tidy_motifs.Rmd’

SUMMARY: processing the following file failed:
  ‘tidy_motifs.Rmd’

Error: Vignette re-building failed.
Execution halted