Hervé Pagès
| Snapshot Date: 2026-03-09 13:40 -0400 (Mon, 09 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/igblastr |
| git_branch: devel |
| git_last_commit: 8294f69 |
| git_last_commit_date: 2026-03-04 02:00:41 -0400 (Wed, 04 Mar 2026) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-10 11:33 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4522 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1041/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| igblastr 1.1.21 (landing page) Hervé Pagès
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | ERROR | OK | |||||||||
| See other builds for igblastr in R Universe. | ||||||||||||||
|
To the developers/maintainers of the igblastr package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/igblastr.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: igblastr |
| Version: 1.1.21 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:igblastr.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings igblastr_1.1.21.tar.gz |
| StartedAt: 2026-03-09 16:22:06 -0400 (Mon, 09 Mar 2026) |
| EndedAt: 2026-03-09 16:22:10 -0400 (Mon, 09 Mar 2026) |
| EllapsedTime: 4.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: igblastr.Rcheck |
| Warnings: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:igblastr.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings igblastr_1.1.21.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/igblastr.Rcheck’
* using R Under development (unstable) (2026-03-01 r89506)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Sonoma 14.8.3
* using session charset: UTF-8
* current time: 2026-03-09 20:22:06 UTC
* using option ‘--no-vignettes’
* checking for file ‘igblastr/DESCRIPTION’ ... OK
* this is package ‘igblastr’ version ‘1.1.21’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘GenomicAlignments’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/igblastr.Rcheck/00check.log’
for details.